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@IDG-Kinase Investigating the Druggable Genome - Kinases

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    19 repositories

    • darkkinasekb

      Public
      Source code for the dark kinase knowledge base
      HTML
      •2•3•0•0•Updated Jun 27, 2024Jun 27, 2024

    • kinase_resource_parsing

      Public
      R
      •
      MIT License
      •0•0•0•0•Updated Jan 24, 2023Jan 24, 2023

    • Proteomics_processing

      Public
      Code related to processing proteomics data from PRM
      R
      •0•0•0•0•Updated Aug 12, 2022Aug 12, 2022

    • indra_analysis

      Public
      Python
      •0•0•0•0•Updated Jul 28, 2022Jul 28, 2022

    • kinase_expression

      Public
      Collection of scripts and shiny app associated with kinase expression
      R
      •0•0•0•0•Updated Sep 1, 2021Sep 1, 2021

    • kinase_perturbation

      Public
      Code to Analyse the Kinase Perturbation Drug Data
      Shell
      •
      MIT License
      •0•0•0•0•Updated Mar 9, 2021Mar 9, 2021

    • CHIP-seq_analysis

      Public
      CHIP-seq Analysis
      Shell
      •0•0•0•0•Updated Mar 6, 2021Mar 6, 2021

    • DarkKinaseTools

      Public
      Tools for Processing Dark Kinase Data
      R
      •
      MIT License
      •0•1•0•0•Updated Feb 25, 2021Feb 25, 2021

    • DGE_seq_analysis

      Public
      Scripts related to processing and analyzing DGE Seq data
      Perl
      •0•0•0•0•Updated Nov 4, 2020Nov 4, 2020

    • sequence_conversion

      Public
      A few simple scripts to convert sequences related to the dark kinase interaction maps
      Perl
      •0•0•0•0•Updated Oct 18, 2019Oct 18, 2019

    • TCGA_Kinase_Analysis

      Public
      Analysis of Kinase Data from the TCGA Project
      HTML
      •
      MIT License
      •0•2•0•0•Updated May 8, 2019May 8, 2019

    • CRISPRi_analysis

      Public
      Code for the analysis and interpretation of CRISPRi high-throughput screen
      Perl
      •0•0•0•0•Updated Feb 11, 2019Feb 11, 2019

    • chemKinase

      Public
      R
      •1•0•0•0•Updated Oct 17, 2018Oct 17, 2018

    • RenMVcell_Differentiation

      Public
      R
      •
      MIT License
      •0•0•0•0•Updated Oct 12, 2018Oct 12, 2018

    • HCA_Kinase_Analysis

      Public
      Analysis of HCA Preview Data
      bioinformaticsscrna-seq-analysis
      HTML
      •
      MIT License
      •0•0•0•0•Updated Sep 27, 2018Sep 27, 2018

    • KinaseCollections

      Public
      Merge and compare the kinome defined by several sources
      R
      •
      MIT License
      •0•0•0•0•Updated Aug 15, 2018Aug 15, 2018

    • smallmoleculesuite

      Public
      R
      •
      MIT License
      •7•0•0•0•Updated Aug 11, 2018Aug 11, 2018

    • Cell_Line_Searching

      Public
      Bit of code to search for Dark Kinase expression in public data sets
      R
      •0•1•0•0•Updated Jul 31, 2018Jul 31, 2018

    • communicating-with-IDG-synapse

      Public
      standard scripts to communicate with the IDG Synapse
      R
      •
      MIT License
      •0•0•0•0•Updated Jul 22, 2018Jul 22, 2018