Tilt series alignment geometry

EmSART's tilt series alignment and reconstruction geometry is based on the models presented in

Castaño-Díez, D., Seybert, A., Frangakis, A.S. (2006). Tilt-series and electron microscope alignment for the correction of the non-perpendicularity of beam and tilt-axis. Journal of Structural Biology.

Kunz, M. & Frangakis, A.S. (2014). Super-sampling SART with ordered subsets. Journal of Structural Biology.

More information about tilt series alignment can be found in alignment.pdf, which can be built using the cmake target Alignment.

make Alignment