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Updated hypothesis testing
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percolator committed Nov 4, 2024
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As a preparation for the Hypothesis Testing convocation, make yourself acquainted with the material below, and subsequently complete any tasks assigned to you in canvas.


2. Read the sections in the Data Science Book on [Hypothesis Testing](https://www.kaell.se/dsbook/statistics/significance.html).
3. Investigate the jupyter notebook on [Differential expression anlaysis of the TCGA breast cancer set](../nb/testing/). If you want some study questions we provide some [here](../nb/testing/questions.md)
4. Read previous years [questions and answers](../qa/testing) on the material.
3. Investigate the jupyter notebook on [Differential expression anlaysis of the TCGA breast cancer set](https://www.kaell.se/dsbook/statistics/testing.html). If you want some study questions we provide some [here](../nb/testing/questions.md)
5. Perform the assignments in Canvas


### Additional/Alternative material

1. StatQuest on [Hypothesis testing](https://www.youtube.com/watch?v=0oc49DyA3hU) and [*p* values](https://www.youtube.com/watch?v=vemZtEM63GY)
2. Khan Academy on [Hypothesis testing](https://www.khanacademy.org/math/statistics-probability/significance-tests-one-sample/more-significance-testing-videos/v/hypothesis-testing-and-p-values)
4. Wikipedia entries for [*p* value](https://en.wikipedia.org/wiki/P-value), [*p* value falacy](https://en.wikipedia.org/wiki/Misuse_of_p-values), [Volcano plots](https://en.wikipedia.org/wiki/Volcano_plot_(statistics)) and [permutation tests](https://en.wikipedia.org/wiki/Permutation_test).
3. Stackexchange comments on [Fisher vs. Neyman & Pearson framework](https://stats.stackexchange.com/questions/23142/when-to-use-fisher-and-neyman-pearson-framework)
4. XKCD on [p-hacking](https://www.explainxkcd.com/wiki/index.php/882:_Significant)

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