Merge branch 'master' of github.com:statisticalbiotechnology/cb2030

statisticalbiotechnology · Oct 31, 2024 · f565a38 · f565a38
2 parents cb7b70b + 8ba7364
commit f565a38
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Showing 3 changed files with 4 additions and 7 deletions.
diff --git a/environment.yml b/environment.yml
@@ -15,7 +15,7 @@ dependencies:
   - pandas
   - numpy
   - scipy
-  - seaborn
+  - seaborn==0.13.2
   - matplotlib
   - ipywidgets
   # Lab 2
@@ -24,7 +24,6 @@ dependencies:
   - pytest
   - pytest-benchmark
   - pip:
-    - cobra
     - escher
-    - gseapy
+    - cobra
     - markupsafe==2.0.1
diff --git a/lab/Lab0/Lab0.ipynb b/lab/Lab0/Lab0.ipynb
@@ -21,7 +21,6 @@
     "\n",
     "from ipywidgets import interact, interact_manual, IntSlider, FloatSlider, Dropdown, Text\n",
     "\n",
-    "import gseapy as gp\n",
     "import sklearn as skl\n",
     "\n",
     "import networkx\n",

diff --git a/lab/Lab0/cb2030-labs-environment.yml b/lab/Lab0/cb2030-labs-environment.yml
@@ -15,7 +15,7 @@ dependencies:
   - pandas
   - numpy
   - scipy
-  - seaborn
+  - seaborn==0.13.2
   - matplotlib
   - ipywidgets
   # Lab 2
@@ -24,7 +24,6 @@ dependencies:
   - pytest
   - pytest-benchmark
   - pip:
-    - cobra
     - escher
-    - gseapy
+    - cobra
     - markupsafe==2.0.1