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64 Open 632 Closed
64 Open 632 Closed
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Issues list

Waters bridging between chains Feature request Adding a feature that does not yet exist.
#1987 opened Nov 7, 2024 by jamesmkrieger
1
Chain ID in parseMMCIF is corresponding to asym_id or auth_asym_id
#1985 opened Nov 4, 2024 by hnguyentt
1
PRS for Trajectory Analysis Problem
#1980 opened Oct 29, 2024 by vahapgazifidan
8
Problem with calcADPAxes
#1975 opened Oct 15, 2024 by karolamik13
2
update clustenm for openmm 8
#1971 opened Oct 9, 2024 by jamesmkrieger
new cif fields (Annotation of Protein Modifications in the PDB)
#1970 opened Oct 9, 2024 by jamesmkrieger
ExtendModel Nodes and Atoms Incompatible
#1962 opened Sep 25, 2024 by rks5854
1
20
ImportError While Using the ProDy Interface in NMWizard
#1961 opened Sep 19, 2024 by DaddyDaddyFish
9
Pdb ligand format changes
#1957 opened Sep 18, 2024 by jamesmkrieger
findClusterCenters
#1951 opened Sep 11, 2024 by mmuratyas
15
searchPfam fails to parse XML
#1933 opened Aug 12, 2024 by NicholasMcCarthy
1
InSty: NameError: name 'Interactions' is not defined
#1932 opened Aug 7, 2024 by TangYiChing
@karolamik13
9
ImportError: druggability package was not found
#1917 opened Jul 19, 2024 by accibio
Python 3.12 Support
#1915 opened Jul 16, 2024 by xavierholt
21
Ensemble superpose
#1912 opened Jul 12, 2024 by Yago52
@atbogetti @sahags
1
float division by zero exception raised if using prody_align with mmCIF files
#1905 opened Jun 26, 2024 by nbruciaferri
1
bad change to mmCIF chain vs segment?
#1902 opened Jun 4, 2024 by jamesmkrieger
How to set the path for ProDy in VMD
#1898 opened May 13, 2024 by kiran923
2
ADP axes has a problem too
#1873 opened Apr 17, 2024 by jamesmkrieger
addMissingAtoms PDBFixer fails with InSty/WatFinder tutorial file Bug A problem with the code.
#1866 opened Apr 16, 2024 by jamesmkrieger
6
add iterpose to catdcd Feature request Adding a feature that does not yet exist.
#1863 opened Apr 10, 2024 by jamesmkrieger
It's now difficult to get pfam full alignments
#1859 opened Apr 8, 2024 by jamesmkrieger
Bug in PQR parser
#1855 opened Mar 29, 2024 by VonBoss
@atbogetti
12
Failure to correctly parse resnames with 4 letters
#1843 opened Mar 14, 2024 by karolamik13
3
error on tutorial Evolution of sequence, structure and dynamics with Evol and SignDy
#1841 opened Mar 13, 2024 by Armanda87
9
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