Skip to content

Issues: nf-core/modules

Caused by: java.nio.channels.OverlappingFileLockException
#6664 by edmundmiller was closed Nov 18, 2024
Closed 13
Batch module updates - Fall 2024
#5828 opened Jun 18, 2024 by edmundmiller
Open 15
Renovate Dashboard 🤖
#4211 opened Oct 24, 2023 by renovate bot
Open
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

453 Open 1,348 Closed
453 Open 1,348 Closed
Author
Filter by author
Loading
Label
Filter by label
Loading
Use alt + click/return to exclude labels
or ⇧ + click/return for logical OR
Projects
Filter by project
Loading
Milestones
Filter by milestone
Loading
Assignee
Filter by who’s assigned
Sort
Sort by
Newest Oldest Most commented Least commented Recently updated Least recently updated Best match
Most reactions
👍 👎 😄 🎉 😕 ❤️ 🚀 👀

Issues list

Create conda-fail.yml on Conda CI failures
#7017 opened Nov 18, 2024 by edmundmiller
Handle GitHub runners possibly running out of space
#7016 opened Nov 18, 2024 by edmundmiller
1
update module: Dragonflye to v1.2.1 update module
#7015 opened Nov 18, 2024 by Daniel-VM
3 of 4 tasks
new subworkflow: fasta_create_index_bismark_bwameth new subworkflow
#7009 opened Nov 17, 2024 by sateeshperi
4 tasks done
1
@sateeshperi
Update quartonotebook to use wave when conda support comes
#7006 opened Nov 16, 2024 by edmundmiller
new subworkflow: fastq_align_pileup_biscuit new subworkflow
#6974 opened Nov 12, 2024 by sateeshperi
4 tasks done
@sateeshperi
new subworkflow: fastq_align_dedup_bwameth new subworkflow
#6973 opened Nov 12, 2024 by sateeshperi
4 tasks done
1
new module: NANOQC new module Adding a new module
#6968 opened Nov 11, 2024 by lfreitasl
4 tasks done
1
@lfreitasl
new module: AGAT/SPFLAGSHORTINTRONS new module Adding a new module
#6963 opened Nov 9, 2024 by GallVp
4 tasks done
@GallVp
new module: HOSTILE/CLEAN new module Adding a new module
#6947 opened Nov 7, 2024 by jfy133
3 of 4 tasks
new module: LIFTON new module Adding a new module
#6944 opened Nov 6, 2024 by GallVp
4 tasks done
@GallVp
Migrate to nf-test for COREOGRAPH update module
#6941 opened Nov 6, 2024 by kbestak
4 tasks done
@kbestak
nf-test for Basicpy update module
#6927 opened Nov 4, 2024 by kbestak
4 tasks done
1
@kbestak
new module: gzrt aka gzrecover new module Adding a new module
#6918 opened Oct 31, 2024 by mazzalab
@mazzalab
new subworkflow: merqury new subworkflow
#6905 opened Oct 30, 2024 by stephenturner
4 tasks done
@stephenturner
2
new subworkflow: fastq_align_parabricks new subworkflow
#6894 opened Oct 29, 2024 by famosab
4 tasks done
1
@famosab @Furentsu
1
[FEATURE] FASTQSCREEN_FASTQSCREEN should accept multiple inputs with a single database
#6890 opened Oct 29, 2024 by ferenckata
2
pigz uncompress missing backslash bug Something isn't working
#6877 opened Oct 28, 2024 by ljwharbers
2 tasks done
1
new module: STIMULUS/CHECKTORCHMODEL new module Adding a new module
#6872 opened Oct 28, 2024 by itrujnara
4 tasks done
1
@itrujnara
new module: stimulus/splitcsv new module Adding a new module
#6871 opened Oct 28, 2024 by yocra3
4 tasks done
1
@yocra3 @luisas
1
New module: dorado
#6866 opened Oct 28, 2024 by lucacozzuto
new module: stimulus/transform new module Adding a new module
#6863 opened Oct 28, 2024 by luisas
3 of 4 tasks
@luisas
new module: Hiphase new module Adding a new module
#6856 opened Oct 25, 2024 by tanyasarkjain
4 tasks done
@tanyasarkjain
new module: PBSV new module Adding a new module Ready for Review
#6855 opened Oct 25, 2024 by tanyasarkjain
4 tasks done
1
@tanyasarkjain
new module: Segger new module Adding a new module
#6845 opened Oct 25, 2024 by khersameesh24
4 tasks done
@khersameesh24
1
ProTip! Exclude everything labeled bug with -label:bug.