Skip to content

Commit

Permalink
Update MEGAHIT container URLs
Browse files Browse the repository at this point in the history
  • Loading branch information
gariem authored Aug 1, 2023
1 parent e198734 commit 9f61438
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions modules/nf-core/megahit/main.nf
Original file line number Diff line number Diff line change
Expand Up @@ -4,8 +4,8 @@ process MEGAHIT {

conda "bioconda::megahit=1.2.9 conda-forge::pigz=2.6"
container "${ workflow.containerEngine == 'singularity' && !task.ext.singularity_pull_docker_container ?
'https://depot.galaxyproject.org/singularity/mulled-v2-0f92c152b180c7cd39d9b0e6822f8c89ccb59c99:8ec213d21e5d03f9db54898a2baeaf8ec729b447-0' :
'biocontainers/mulled-v2-0f92c152b180c7cd39d9b0e6822f8c89ccb59c99:8ec213d21e5d03f9db54898a2baeaf8ec729b447-0' }"
'https://depot.galaxyproject.org/singularity/megahit:1.2.9--h5b5514e_2' :
'quay.io/biocontainers/megahit:1.2.9--h5b5514e_3' }"

input:
tuple val(meta), path(reads)
Expand Down

0 comments on commit 9f61438

Please sign in to comment.