Update modules/nf-core/preseq/lcextrap/main.nf

Co-authored-by: Phil Ewels <[email protected]>
nf-core · Mar 11, 2024 · 20583ca · 20583ca
1 parent f39ef5b
commit 20583ca
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/modules/nf-core/preseq/lcextrap/main.nf b/modules/nf-core/preseq/lcextrap/main.nf
@@ -21,7 +21,7 @@ process PRESEQ_LCEXTRAP {
 
     script:
     def args = task.ext.args ?: ''
-    args = task.attempt > 1 ? args.join(' -defects') : args
+    args = task.attempt > 1 ? args.join(' -defects') : args  // Disable testing for defects
     def prefix = task.ext.prefix ?: "${meta.id}"
     def paired_end = meta.single_end ? '' : '-pe'
     """