Back to pull request #5091

fix annoying PRESEQ failure for methylseq #7429

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Re-run triggered March 11, 2024 11:29

mashehu

#5091

maxulysse:preseq_lcextrap

Status Failure

Total duration 6m 26s

Artifacts –

test.yml

on: pull_request

nf-test-changes

Matrix: nf-test

Matrix: nf-core-lint

Matrix: pytest

Annotations

3 errors and 3 warnings

nf-test (preseq/lcextrap, singularity)

Error: EEXIST: file already exists, mkdir '/home/ubuntu/.nf-test'

nf-test (preseq/lcextrap, conda)

Error: EEXIST: file already exists, mkdir '/home/ubuntu/.nf-test'

confirm-pass

Process completed with exit code 1.

nf-test-changes

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: mirpedrol/paths-filter@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

pytest-changes

Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: mirpedrol/paths-filter@main. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.

The `python-version` input is not set. The version of Python currently in `PATH` will be used.