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pyNBS.data_import_tools

Justin Huang edited this page Jan 24, 2018 · 12 revisions

Description

This module contains functions for loading various types of files used in the core pyNBS algorithm as well as other helper or sub-functions relating to the loading of the somatic mutation data or the molecular network.

Functions in this module

This module contains the following functions (bolded functions are key pyNBS functions):

  • [degree_shuffNet]
  • [filter_weighted_network]
  • [label_shuffNet]
  • [load_binary_mutation_data]
  • [load_network_file]
  • [load_params]
  • [process_TCGA_MAF]
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