Skip to content

:arrow-up: fix minimal scikit-learn version #73

:arrow-up: fix minimal scikit-learn version

:arrow-up: fix minimal scikit-learn version #73

Workflow file for this run

name: Test that tutorial runs on latest colab image
on:
push:
schedule:
- cron: '0 2 3 * *'
jobs:
test:
name: Test
runs-on: ubuntu-latest-4core # increase disk space
# https://console.cloud.google.com/artifacts/docker/colab-images/europe/public/runtime
container:
image: europe-docker.pkg.dev/colab-images/public/runtime:latest
steps:
- uses: actions/checkout@v4
- name: Dev - Install njab (from branch) - optional
if: github.event_name == 'push'
run: |
echo GITHUB_REF= $GITHUB_REF
echo GITHUB_SHA= $GITHUB_SHA
echo "Branch or Tag: ${{ github.ref }}"
pip install .
# pip install git+https://github.com/RasmussenLab/njab.git@$GITHUB_SHA
cd docs
echo
echo Installed version of njab:
python3 -c "import njab; print(njab.__version__)"
- name: Test tutorials
run: |
python3 -m pip install papermill ipykernel njab
cd docs/tutorial
papermill explorative_analysis.ipynb --help-notebook
papermill log_reg.ipynb --help-notebook
papermill log_reg.ipynb log_reg_tested.ipynb
papermill explorative_analysis.ipynb explorative_analysis_tested.ipynb