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Developer continuous#84

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enryH merged 73 commits intodeveloperRasmussenLab/MOVE:developerfrom developer-continuous-v3RasmussenLab/MOVE:developer-continuous-v3Copy head branch name to clipboardJun 7, 2024

+27,911-297

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Commits on Jan 5, 2023

• 🔊 Capture warnings

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• 🐛 VAE and data objects handle missing data type

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• 🚧 Update tasks for missing data type

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• 🚧 Committing provisional changes (not finished)

  

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• 🚧 min max feature pertubation

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• Last batch of changes (unfinished)

  

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• preprocessing changes

  

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• Version that reaches training

  

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• last version

  

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• Changes on writing the final files

  

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• Last commit:

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• # Added plus_std and minus_std as target values

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• New changes for plotting new features

  

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• Note in funtion description updated

  

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• Perturbation visualization added:

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• :build: Perturbation visualization

  

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• 🎨 ✨

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• 📝 Make output_subpath optional

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• ⏪ Revert styling in conflicting files

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• 🎨 Rename results directory

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• 🎨

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• ✨ Random continuous dataset added.

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• 🎨 Type hinting

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• ✨ Update ID associations module

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• 🎨 ♻️ Refactoring/styling

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Commits on Jan 6, 2023

• 🔧 Update default config

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Commits on Jan 24, 2023

• ✨ 🚧 🧐

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• Added random_basic config files

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• 🚧

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• ✨ 🚧

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• (previous commit's description)

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• ✨ 🚧

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• 🎨 🔥 🔧 💡

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• 🔥 🙈 Ignore VS Code settings

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Commits on Apr 26, 2023

• 🐛 Fix plot legend (feature importance plot)

  

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Commits on Apr 28, 2023

• 🎨 🔥 ✨

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Commits on Jun 28, 2023

• 🔀 Merge branch 'developer'

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• 🔥 🙈 Remove/ignore DS Store files

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• 🔥 🙈 Remove/ignore supplementary outputs

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• 🎨 Styling/sorting imports

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• 🎨 Styling

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• 🐛 Properly re-shape categorical recon

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Commits on Jul 12, 2023

• 🎨 ⚡ 🐛 Editing pull request.

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• 🐛 🔧

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Commits on Feb 1, 2024

• 🐛 Keep dimensions if NaN

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Commits on Feb 2, 2024

• 🔥 Remove

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Commits on May 16, 2024

• Merge branch 'developer' into developer-continuous-v3

  

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• ✨ add workflow for formatting checks

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• 🎨 format files

  

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• ✨ lint src files with flake8 - might introduce regression errors

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• 🐛 configure flake8 for black formatting

  

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• 🐛 ⏪ HYDRA_VERSION_BASE needed for imports

  

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• 🐛 regression: merging branches lead to name mismatch

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• 🐛 correct value in yaml file

  

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• ✅ Add integration test based on tutorial

  

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Commits on May 31, 2024

• 🎨 format yaml files (some had no last blank line)

  

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• 🎨 add typehints and always return figure for plotting fcts

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• 🎨 split bayes and t-test run in CI

  

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Commits on Jun 1, 2024

• 🎨 format file

  

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Commits on Jun 4, 2024

• ⏪ random small defaults restored

  

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• 🔧 Add default KS config

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• 🔧 Use default KS config

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• ⚡ reduce action runtime by configuring tasks

  

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• 🎨 Make sure correct colormap is used

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• Merge branch 'developer-continuous-v3' of https://github.com/RasmussenLab/MOVE into developer-continuous-v3

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• 🔧 udpate flake8 configuration according to defaults

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• ✨ dry-run continuous configuration sample data

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• 🎨 make line 88 characters long, remove some expections from flake8

  

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• 🐛 error due to black formatting?

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• ✨ run continous example

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• 🐛 four latent dimensions are required for t-test

  

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Commits on Jun 7, 2024

• ⚡ run latent job, try to increase speed for t-test

  

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• ⚡ speed up and balance both jobs' runtime

  

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