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@ComputationalProteomics

Computational Proteomics

Computational Proteomics at department of Immunotechnology, Lund University

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  1. NormalyzerDE NormalyzerDE Public

    Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.

    R 22 6

  2. OmicLoupe OmicLoupe Public

    Understanding expression across comparisons and datasets through interactive visualization

    R 2 3

  3. ProteinRollup ProteinRollup Public

    Collection of R-based protein rollups, heavily inspired by InfernoRDN

    R

  4. ProteinRollupShiny ProteinRollupShiny Public

    Shiny server for protein rollup

    R

  5. FusariumResponseInOatMethods FusariumResponseInOatMethods Public

    Interactive interface for study of Fusarium infection in oat

    R

  6. OmicLoupeSupplementaryMaterials OmicLoupeSupplementaryMaterials Public

    Code and parameter files related to the OmicLoupe manuscript supplementary materials

    HTML

Repositories

Showing 9 of 9 repositories
  • NormalyzerDE Public

    Tools for normalization, evaluation of outliers, technical biases and batch effects and differential expression analysis.

    ComputationalProteomics/NormalyzerDE’s past year of commit activity
    R 22 6 0 0 Updated Oct 17, 2024
  • proteoDeconv-manuscript Public

    Notebooks accompanying the manuscript for proteoDeconv

    ComputationalProteomics/proteoDeconv-manuscript’s past year of commit activity
    R 0 MIT 0 0 0 Updated Oct 1, 2024
  • proteoDeconv Public

    R package for cell type deconvolution of proteomics data

    ComputationalProteomics/proteoDeconv’s past year of commit activity
    R 0 0 0 0 Updated Sep 30, 2024
  • ComputationalProteomics/PlasmaEnrichment’s past year of commit activity
    0 0 0 0 Updated Aug 3, 2024
  • OmicLoupe Public

    Understanding expression across comparisons and datasets through interactive visualization

    ComputationalProteomics/OmicLoupe’s past year of commit activity
    R 2 MIT 3 7 0 Updated Feb 9, 2023
  • OmicLoupeSupplementaryMaterials Public

    Code and parameter files related to the OmicLoupe manuscript supplementary materials

    ComputationalProteomics/OmicLoupeSupplementaryMaterials’s past year of commit activity
    HTML 0 MIT 0 0 0 Updated Jan 21, 2021
  • ProteinRollup Public

    Collection of R-based protein rollups, heavily inspired by InfernoRDN

    ComputationalProteomics/ProteinRollup’s past year of commit activity
    R 0 Apache-2.0 0 2 0 Updated Jun 4, 2020
  • FusariumResponseInOatMethods Public

    Interactive interface for study of Fusarium infection in oat

    ComputationalProteomics/FusariumResponseInOatMethods’s past year of commit activity
    R 0 0 0 0 Updated Feb 6, 2020
  • ProteinRollupShiny Public

    Shiny server for protein rollup

    ComputationalProteomics/ProteinRollupShiny’s past year of commit activity
    R 0 0 0 0 Updated Nov 8, 2019

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