gseapy-1.1.0

What's Changed

New:

• Add gsva module: This is the Rust implementation of GSVA algorithm. #226

Fixed:

• #211, Now, pheno_pos and pheno_neg can define with

from gseapy import GSEA

gs = GSEA(data="./tests/extdata/Leukemia_hgu95av2.trim.txt",
                 gene_sets='KEGG_2016',
                 classes = "./tests/extdata/Leukemia.cls"
)
# set here
gs.pheno_pos = ...
gs.pheno_neg = ...
gs.run()

• improvement for barplot #224. Specify colors for each group explicity

barplot( ....,  color= {'KEGG_2021_Human': 'salmon', 'MSigDB_Hallmark_2020':'darkblue'})

Full Changelog: v1.0.6...v1.1.0