fix gseaplot2

zqfang · Feb 23, 2024 · 652eb44 · 652eb44
2 parents 0c2b136 + d3addfe
commit 652eb44
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Showing 2 changed files with 10 additions and 6 deletions.
diff --git a/gseapy/base.py b/gseapy/base.py
@@ -183,11 +183,15 @@ def _load_data(self, exprs: Union[str, pd.Series, pd.DataFrame]) -> pd.DataFrame
         elif isinstance(exprs, pd.Series):
             # change to DataFrame
             self._logger.debug("Input data is a Series with gene names")
-            if exprs.name is None:
-                # rename col if name attr is none
-                exprs.name = "sample1"
-            elif exprs.name.dtype != "O":
-                exprs.name = exprs.name.astype(str)
+            if not isinstance(exprs.name, str):
+                if exprs.name is None:
+                    # rename col if name attr is none
+                    exprs.name = "sample1"
+                elif hasattr(exprs.name, "dtype"):
+                    if exprs.name.dtype != "O":
+                        exprs.name = exprs.name.astype(str)
+                else:
+                    exprs.name = str(exprs.name)
             rank_metric = exprs.reset_index()
         elif os.path.isfile(exprs):
             rank_metric = self._read_file(exprs)

diff --git a/gseapy/plot.py b/gseapy/plot.py
@@ -1342,7 +1342,7 @@ def axes_hits(
         trans2 = transforms.blended_transform_factory(ax2.transData, ax2.transAxes)
         # align hits to runes
         ax2.vlines(
-            [0, len(self.runes) - 1],
+            [1, len(self.runes[0])],
             0,
             1,
             linewidth=0.5,