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CovidRtMethods
CovidRtMethods PublicComparing current and most popular methods for estimating the effective reproduction number R in the literatures
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SMCRejuvenation
SMCRejuvenation PublicLightweight Metropolis Hasting as a rejuvenation procedures for particles in Sequential Monte Carlo. Inference in Higher Order Probabilistic Languages with Pytorch
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ParticleRt
ParticleRt PublicParticle Filter implemented in Pomp package in R. Experimented with different transition and observation equations
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