docs: typo fix in initialization.md (#95)

Signed-off-by: CJ Herrmann <[email protected]>

docs/guides/initialization.md

@@ -42,7 +42,7 @@ The following configuration options are available.
 | `execution_mode` | Trigger a full _ZARP-cli_ run (`RUN`), a dry run (`DRY_RUN`; external tools are not actually run, only logs what _would be_ run; useful for testing) or prepare a _ZARP_ run (`PREPARE_RUN`; _ZARP-cli_ is run normally, including all external tools, up until the point of the execution of the actual _ZARP_ workflow; use to manually check metadata table before _ZARP_ execution)  | `RUN` |
 | `cores` | Number of CPU cores that Snakemake is run with when executing _ZARP_ and the auxiliary workflows (fetching libraries from [SRA][sra], inferring metadata) | `1` |
 | `dependency_embedding` | Whether Snakemake should use `CONDA` or containers (`SINGULARITY`) to manage dependencies of each workflow step/rule | `CONDA` |
-| `genome_assemblies_map` | A headerless 3-column semicolon-separated mapping table of organism/source trivial names (e.g., `homo_sapiens`), optional comma-separated aliases such as NCBI taxon IDs and/or organism/source short names (e.g., `7227,dmelanogaster`) and a corresponding genome assembly name (e.g., `GRCm39`); a table in the required format is shipped with _ZARP_cli_ in the the default location; it can be amended with additional aliases; note that for [`genomepy`][genomepy] to be able to pull genome annotations for organisms/sources that [HTSinfer][htsinfer] inferred, NCBI taxon ID aliases are _required_  | `./data/genome_assemblies.map` relative to the location of the ZARP-cli repository |
+| `genome_assemblies_map` | A headerless 3-column semicolon-separated mapping table of organism/source trivial names (e.g., `homo_sapiens`), optional comma-separated aliases such as NCBI taxon IDs and/or organism/source short names (e.g., `7227,dmelanogaster`) and a corresponding genome assembly name (e.g., `GRCm39`); a table in the required format is shipped with _ZARP_cli_ in the the default location; it can be amended with additional aliases; note that for [`genomepy`][genomepy] to be able to pull genome annotations for organisms/sources that [HTSinfer][htsinfer] inferred, NCBI taxon ID aliases are _required_  | `./data/genome_assemblies.csv` relative to the location of the ZARP-cli repository |
 | `resources_version` | Whether to always download the latest available version of genome annotations for a given organism/source from Ensembl (enter `None`; default) or whether to use a specific version of the corresponding Ensembl database (e.g., `100`); note that the different Ensembl databases (e.g., for fungi, plants) use a different versioning scheme, so pinning a particular database version may lead to unexpected outcomes | `None` |
 | `rule_config` | A configuration file for the _ZARP_ workflow that sets specific parameters for each workflow step ("rule"); see [ZARP][zarp] documentation for details | `None` |
 | `profile` | Path to [Snakemake profile][snakemake-profiles] to be used for the _ZARP_ workflow; use this to optimize _ZARP_ for your specific compute environment |