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udpate package

udpate package #158

Triggered via push October 26, 2023 15:36
Status Failure
Total duration 39m 38s
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docker-sif.yml

on: push
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1 error and 16 warnings
docker
buildx failed with: ERROR: failed to solve: process "/bin/sh -c apt-get update && apt-get install -qq -y --no-install-recommends libnetcdf-dev libgl1-mesa-dev libglu1-mesa-dev tcl8.6-dev tk8.6-dev && rm -rf /var/lib/apt/lists/* && R -e \"BiocManager::install(c('xcms','IPO','sva','WGCNA', 'KEGGREST', 'KEGGgraph', 'SSPA','Rdisop', 'qvalue', 'GlobalAncova', 'globaltest', 'siggenes', 'Rgraphviz','ChemmineR','metaMS', 'msPurity', 'mixOmics', 'fgsea', 'Rita','lumi','CompoundDb','MetaboAnnotation','MsBackendMgf','MsBackendMsp','genefilter','metapone'))\" && R -e \"install.packages(c('Autotuner','XMLSchema','SSOAP','metfRag','xMSannotator'), repos = 'https://***.github.io/drat',type = 'source')\" && install2.r --error ChemoSpec webchem RAMClustR InterpretMSSpectrum tcltk2 ROCS plotly caret caretEnsemble pROC gWQS UpSetR multcomp isva h2o && installGithub.r rwehrens/ChemometricsWithR rwehrens/BatchCorrMetabolomics KechrisLab/MSPrep ***/MetDIA ropensci/rfigshare Aurametrix/R/GRAPH/MetabNet kuppal2/xMWAS ***/x13cms aberHRML/classyfireR ***/enviGCMS ***/pmd ***/mzrtsim ***/rmwf lifs-tools/rmzTab-m && rm -rf /tmp/downloaded_packages && strip /usr/local/lib/R/site-library/*/libs/*.so" did not complete successfully: exit code: 1
docker
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/checkout@v2, docker/login-action@v1, docker/setup-buildx-action@v1, docker/build-push-action@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
docker
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
docker
The `save-state` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/