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DESeq2 feedback #1011
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DESeq2 feedback #1011
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docs/content/DESeq2.md
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###### Count dispersions | ||
For each design contrast, you can specify which samples should be used to estimate the count dispersions by giving them a label. | ||
This can be used to exclude failed samples from the analysis. | ||
In general, more samples improves the dispersion estimate. | ||
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In contrast `stages_3_1` all samples will be used to estimate the count dispersions, including sample_3 and sample_4. | ||
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In contrast `conditions_knockout_wildtype` sample_5 and sample_6 will **not** be used to estimate the count dispersions. |
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Sample 5 and 6 are not taken along because they are empty right? Perhaps explain that clearer.
Maarten-vd-Sande
approved these changes
Sep 15, 2023
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very clear!
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