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cargo fmt to format code Coverage #164: Commit 4be9148 pushed by SimonVandeVyver
September 12, 2024 13:56 1m 39s text-compression
text-compression
September 12, 2024 13:56 1m 39s
remove trailing space Coverage #163: Commit 7e17bd6 pushed by SimonVandeVyver
September 12, 2024 13:54 1m 52s text-compression
text-compression
September 12, 2024 13:54 1m 52s
Add documentation to text compression Coverage #162: Commit 224fa51 pushed by SimonVandeVyver
September 11, 2024 11:59 1m 42s text-compression
text-compression
September 11, 2024 11:59 1m 42s
add tests for text-compression Coverage #161: Commit 2c14c52 pushed by SimonVandeVyver
September 11, 2024 09:46 1m 41s text-compression
text-compression
September 11, 2024 09:46 1m 41s
use uncompressed text for SA construction Coverage #160: Commit e476461 pushed by SimonVandeVyver
September 11, 2024 08:43 1m 43s text-compression
text-compression
September 11, 2024 08:43 1m 43s
fix tests to only use characters of peptide alphabet Coverage #159: Commit b0a804d pushed by SimonVandeVyver
September 11, 2024 07:54 1m 43s text-compression
text-compression
September 11, 2024 07:54 1m 43s
Represent chars in protein text with 5 bits, tests don't work yet Coverage #158: Commit fb6e77a pushed by SimonVandeVyver
September 11, 2024 06:49 1m 47s text-compression
text-compression
September 11, 2024 06:49 1m 47s
debug code Coverage #157: Commit 9bec271 pushed by tibvdm
September 3, 2024 09:20 1m 48s feature/local
feature/local
September 3, 2024 09:20 1m 48s
Add a non-parallel function for the suffix array Coverage #156: Commit c77b1ee pushed by tibvdm
September 2, 2024 08:01 1m 48s feature/split-fa-summary
feature/split-fa-summary
September 2, 2024 08:01 1m 48s
use a fast-rank bitvector implementation to find the proteins Coverage #155: Commit 96e746e pushed by tibvdm
August 30, 2024 13:01 1m 48s feature/split-fa-summary
feature/split-fa-summary
August 30, 2024 13:01 1m 48s
fix right bounds bug Coverage #154: Commit ad9b885 pushed by tibvdm
August 29, 2024 13:23 1m 40s feature/split-fa-summary
feature/split-fa-summary
August 29, 2024 13:23 1m 40s
remove protein array allocations Coverage #153: Commit c4d0fdf pushed by tibvdm
August 29, 2024 11:42 1m 45s feature/split-fa-summary
feature/split-fa-summary
August 29, 2024 11:42 1m 45s
remove protein array allocations Coverage #152: Commit bcd86b2 pushed by tibvdm
August 29, 2024 08:56 1m 46s feature/split-fa-summary
feature/split-fa-summary
August 29, 2024 08:56 1m 46s
attempt on not having to allocate a lot of arrays for proteins Coverage #151: Commit 64b9af5 pushed by tibvdm
August 29, 2024 08:16 1m 47s feature/split-fa-summary
feature/split-fa-summary
August 29, 2024 08:16 1m 47s
return references of the proteins instead of cloning the entire struct Coverage #150: Commit cad3fb5 pushed by tibvdm
August 28, 2024 18:31 1m 40s feature/split-fa-summary
feature/split-fa-summary
August 28, 2024 18:31 1m 40s
Merge branch 'feature/sa-bounds-optimization' into feature/split-fa-s… Coverage #149: Commit 0bdd1f2 pushed by tibvdm
August 28, 2024 13:48 1m 43s feature/split-fa-summary
feature/split-fa-summary
August 28, 2024 13:48 1m 43s
split the functional annotations Coverage #148: Commit 8067226 pushed by tibvdm
August 28, 2024 12:58 1m 49s feature/split-fa-summary
feature/split-fa-summary
August 28, 2024 12:58 1m 49s
fix the print code Coverage #147: Commit 352bcb7 pushed by tibvdm
August 28, 2024 09:21 1m 50s feature/sa-bounds-optimization
feature/sa-bounds-optimization
August 28, 2024 09:21 1m 50s
debug bounds Coverage #146: Commit e87e0cf pushed by tibvdm
August 28, 2024 09:18 1m 42s feature/sa-bounds-optimization
feature/sa-bounds-optimization
August 28, 2024 09:18 1m 42s
fix the amount of iterations to calculate the k-mers Coverage #145: Commit 99cc2a5 pushed by tibvdm
August 28, 2024 09:13 1m 56s feature/sa-bounds-optimization
feature/sa-bounds-optimization
August 28, 2024 09:13 1m 56s
division by 0 fix Coverage #144: Commit c3000ff pushed by tibvdm
August 28, 2024 08:55 1m 38s feature/sa-bounds-optimization
feature/sa-bounds-optimization
August 28, 2024 08:55 1m 38s
division by 0 fix Coverage #143: Commit a1c3cdd pushed by tibvdm
August 28, 2024 08:54 1m 39s feature/sa-bounds-optimization
feature/sa-bounds-optimization
August 28, 2024 08:54 1m 39s
division by 0 fix Coverage #142: Commit 3db59a0 pushed by tibvdm
August 28, 2024 08:53 1m 40s feature/sa-bounds-optimization
feature/sa-bounds-optimization
August 28, 2024 08:53 1m 40s
remove equate Coverage #141: Commit 428c63b pushed by tibvdm
August 28, 2024 08:11 1m 41s feature/sa-bounds-optimization
feature/sa-bounds-optimization
August 28, 2024 08:11 1m 41s
add - to the alphabet Coverage #140: Commit bfc358f pushed by tibvdm
August 28, 2024 07:12 1m 45s feature/sa-bounds-optimization
feature/sa-bounds-optimization
August 28, 2024 07:12 1m 45s