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Update progress message for ref proteome db downloads
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pverscha committed Oct 6, 2022
1 parent 819b5a9 commit cdb5ffe
Showing 1 changed file with 1 addition and 1 deletion.
2 changes: 1 addition & 1 deletion scripts/build_database.sh
Original file line number Diff line number Diff line change
Expand Up @@ -372,7 +372,7 @@ download_and_convert_all_sources() {
rm -rf "$DB_INDEX_OUTPUT"
mkdir -p "$DB_INDEX_OUTPUT"

reportProgress -1 "Building database index for $DB_TYPE." 2
reportProgress -1 "Downloading database index for $DB_TYPE." 3

curl --continue-at - --create-dirs "$DB_SOURCE" --silent | zcat | java -jar "$CURRENT_LOCATION/helper_scripts/XmlToTabConverter.jar" 5 50 "$DB_TYPE" "$VERBOSE" | node "$CURRENT_LOCATION/helper_scripts/WriteToChunk.js" "$DB_INDEX_OUTPUT" "$VERBOSE"

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