Migrate to Postgres + make scripts more consistent #52
Workflow file for this run
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| on: | |
| pull_request: | |
| permissions: | |
| pull-requests: write | |
| checks: write | |
| env: | |
| CACHE_KEY: CI | |
| jobs: | |
| dependencies: | |
| name: Install dependencies | |
| runs-on: ubuntu-latest | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: dtolnay/rust-toolchain@stable | |
| - uses: Swatinem/rust-cache@v2 | |
| id: cache | |
| with: | |
| shared-key: ${{ env.CACHE_KEY }} | |
| - run: cd scripts/helper_scripts/unipept-database-rs && cargo fetch | |
| if: ${{ !steps.cache.outputs.cache-hit }} | |
| build: | |
| name: Build binaries | |
| runs-on: ubuntu-latest | |
| needs: [ dependencies ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: dtolnay/rust-toolchain@stable | |
| - uses: Swatinem/rust-cache@v2 | |
| with: | |
| shared-key: ${{ env.CACHE_KEY }} | |
| - run: cd scripts/helper_scripts/unipept-database-rs && cargo build --release | |
| format: | |
| name: Check formatting | |
| runs-on: ubuntu-latest | |
| needs: [ dependencies, build ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: dtolnay/rust-toolchain@stable | |
| with: | |
| components: rustfmt | |
| - uses: Swatinem/rust-cache@v2 | |
| with: | |
| shared-key: ${{ env.CACHE_KEY }} | |
| - run: cd scripts/helper_scripts/unipept-database-rs && cargo fmt --all --check | |
| lint: | |
| name: Linting | |
| runs-on: ubuntu-latest | |
| needs: [ dependencies, build ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: dtolnay/rust-toolchain@stable | |
| with: | |
| components: clippy | |
| - uses: Swatinem/rust-cache@v2 | |
| with: | |
| shared-key: ${{ env.CACHE_KEY }} | |
| - uses: giraffate/clippy-action@v1 | |
| with: | |
| clippy_flags: -- -D warnings | |
| reporter: 'github-pr-check' | |
| fail_on_error: true | |
| github_token: ${{ secrets.GITHUB_TOKEN }} | |
| workdir: scripts/helper_scripts/unipept-database-rs | |
| test: | |
| name: Run tests | |
| runs-on: ubuntu-latest | |
| needs: [ dependencies, build ] | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - uses: dtolnay/rust-toolchain@stable | |
| - uses: Swatinem/rust-cache@v2 | |
| with: | |
| shared-key: ${{ env.CACHE_KEY }} | |
| - run: cd scripts/helper_scripts/unipept-database-rs && cargo test |