test

app/controllers/mpa/pept2data_controller.rb

@@ -1,50 +1,32 @@
 class Mpa::Pept2dataController < Mpa::MpaController
   include SuffixArrayHelper
 
-  def get_time
-    Process.clock_gettime(Process::CLOCK_MONOTONIC, :millisecond)
-  end
-
   def pept2data
     peptides = params[:peptides] || []
     missed = params[:missed] || false
     equate_il = params[:equate_il].nil? ? true : params[:equate_il] == 'true'
 
+    @response = Hash.new
+
     if peptides.empty?
       return
     end
 
-    @response = Hash.new
-
-    search_time = get_time
-
     # Request the suffix array search service
     search_results = search(peptides, equate_il)
 
-    search_time = get_time - search_time
-
-    collect_taxa_time = get_time
-
     # Collect all lca's to look up the lineages
     taxa = []
     search_results["result"].each do |result|
       taxa.append(result["lca"])
     end
 
-    collect_taxa_time = get_time - collect_taxa_time
-
-    collect_lineage_time = get_time
-
     # Retrieve all lineages at once
     @lineages = Hash.new
     Lineage.find(taxa).each do |lineage|
       @lineages[lineage.taxon_id] = lineage.to_a_idx
     end
 
-    collect_lineage_time = get_time - collect_lineage_time
-
-    construct_response_time = get_time
-
     # Fill the response hash with the search results
     search_results["result"].each do |result|
       @response[result["sequence"]] = {
@@ -57,13 +39,5 @@ def pept2data
         }
       }
     end
-
-    construct_response_time = get_time - construct_response_time
-
-    @timings = Hash.new
-    @timings["search"] = search_time
-    @timings["collect_taxa"] = collect_taxa_time
-    @timings["collect_lineage"] = collect_lineage_time
-    @timings["construct_response"] = construct_response_time
   end
 end