extend genes in complete genomes to start/stop codons#5

Merged

ninewise merged 16 commits intomainfrom fix/complete-start

Oct 6, 2021

+228-29

Commits on Sep 21, 2021

extend genes in complete genomes to start/stop codons
Felix Van der Jeugt
committed
use corrected dna_start_t
Felix Van der Jeugt
committed
revert "extend genes in complete genomes to start/stop codons"
Felix Van der Jeugt
committed
fix ACGT typo to correct complete predictions
Felix Van der Jeugt
committed
include reverse stop codon in meta output
Felix Van der Jeugt
committed
unfix start1/stop1 filenames
Felix Van der Jeugt
committed
infinity is sometimes smaller in FGS
Felix Van der Jeugt
committed
dropme: start with start states
Felix Van der Jeugt
committed

Commits on Sep 22, 2021

negate strcmp
Felix Van der Jeugt
committed
invert s_save to avoid negative numbers
Felix Van der Jeugt
committed
compare to negative strand for dna_start_t_withstop
Felix Van der Jeugt
committed
add quality measuring scripts
Felix Van der Jeugt
committed

Commits on Sep 23, 2021

add last nights benchmarks to the evaluation README
Felix Van der Jeugt
committed
include start and stop codons in output
Felix Van der Jeugt
committed

Commits on Sep 29, 2021

allow empty sequences
Felix Van der Jeugt
committed
run prodigal without meta option
Felix Van der Jeugt
committed