Release 2.2.2

Milestone

• https://github.com/umccr/data-portal-apis/milestone/20?closed=1

Release Validation Documentation

• https://docs.google.com/document/d/1KZlO_VLieDc2nNPqkaH2UzY5lLV82I9eL_S64X3xEu0/edit

What's Changed

• Added the plan about automated pipeline extension by @victorskl in #665
• Deprecated data domain name pattern by @victorskl in #666
• Added Portal database backup documentation by @victorskl in #667
• Add script to generate bssh sqs event payload by @reisingerf in #668
• Fix: Running local docker-compose.yml by @williamputraintan in #670
• Fixed docker compose mysql-8.4 for CodeBuild CI by @victorskl in #675
• PRID typos by @pdiakumis in #677
• Fixed and pinned docker compose mysql-8.0 for CodeBuild CI and local dev by @victorskl in #676
• Added Portal Run ID documentation by @victorskl in #669
• Added test case to debug & verify wgs rerun lib skip auto-pairing by @victorskl in #679
• Improved RNAsum v1 input keys test cases by @victorskl in #680
• Update RNAsum orchestration by @skanwal in #674
• Added ggshield config by @victorskl in #681
• Fixed BSSH mock event generator script by @victorskl in #682
• Upgraded to yarn-4.2.2 by @victorskl in #683
• Fix/security issue fix from dependabot alerts by @raylrui in #687
• Release 2.2.2rc1 by @victorskl in #688
• replace status page domain name by @raylrui in #689
• Added Portal LabMetadata LibraryID suffix annotation treatment by @victorskl in #690
• Added documentation on how to trigger DRAGEN Alignment QC by @victorskl in #692
• Added Tumor Normal engineParameter override for tesUseInputManifest never by @victorskl in #693
• Updated LabMetadata model enum for assay, type, source by @victorskl in #695
• Added support for EventBridge S3 event processing by @victorskl in #696
• Updated doc for WTS sample with multiple lane FASTQs by @victorskl in #697
• Updated LabMetadata model enum for assay, type, source - migration script by @victorskl in #698
• Bumped dependencies by @victorskl in #699
• Fixed pandas dataframe applymap future warning by @victorskl in #700
• Updated doc library_suffix.md by @victorskl in #701
• Implemented Subject endpoint to include ctTSOv2 results from ICAv2 BYOB by @victorskl in #702
• Fixed Subject having no ctTSOv2 assay library by @victorskl in #703
• Release 2.2.2rc2 by @victorskl in #704
• Feat: Additional Filter for S3 Objects by @williamputraintan in #706
• add content disposition header for s3 presign api by @raylrui in #705
• add filename in disposition header by @raylrui in #708
• Bumped dependencies by @victorskl in #709
• Release 2.2.2rc3 by @victorskl in #710
• Release 2.2.2 by @victorskl in #711

New Contributors

• @pdiakumis made their first contribution in #677
• @raylrui made their first contribution in #687

Full Changelog: 2.2.1...2.2.2