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Merge pull request #723 from umccr/add-cttso-assay-with-v2-pipeline
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Added viewing ctTSO sample analysis results from v2.6.0 pipeline
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victorskl authored Sep 19, 2024
2 parents 7549ec3 + 4e607dd commit d706307
Showing 1 changed file with 3 additions and 2 deletions.
5 changes: 3 additions & 2 deletions data_portal/models/s3object.py
Original file line number Diff line number Diff line change
Expand Up @@ -139,10 +139,11 @@ def get_subject_sash_results(self, subject_id: str, **kwargs) -> QuerySet:
return qs

def get_subject_cttsov2_results(self, subject_id: str, **kwargs) -> QuerySet:
# get cttsov2 libraries
# We are to show analysis done by cttsov2 pipeline from ICA v2 BYOB bucket
# Get both ctTSO and ctTSOv2 libraries of the Subject
subject_meta_list: List[LabMetadata] = LabMetadata.objects.filter(
subject_id=subject_id,
assay__iexact=str(LabMetadataAssay.CT_TSO_V2.value).lower()
assay__in=[LabMetadataAssay.CT_TSO_V2.value, LabMetadataAssay.CT_TSO.value],
).all()

cttsov2_libraries: List[str] = list()
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