A Go package for engineering organisms.

Rapid & standardized annotation of bacterial genomes, MAGs & plasmids

MOB-suite: Software tools for clustering, reconstruction and typing of plasmids from draft assemblies

Identification & characterization of bacterial plasmid-borne contigs from short-read draft assemblies.

Software for prediction of plasmid sequences in metagenomic assemblies

Plascad is a computationally efficient tool designed for plasmids classification, antibiotic resistance genes (ARGs) annotation and plasmid visualization.

QUEEN: a framework to generate quinable and efficiently editable nucleotide sequence resources

A Go package for designing DNA.

Plasmid Atlas - A web interface to browse for plasmids and their associated genes. Visit us at:

Targeted Detection and Reconstruction of Plasmids

a DNA assembly library

Modular cloning simulation with the MoClo framework in Python

Software to identify plasmid sequence data from metagenome using logistic regression and Minhash

An ensemble of plasmid classification tools

Software to identify known plasmid sequence from metagenomic assembly using Minhash

Plasmid assembly, gene identification and annotation pipeline

repository-based plasmid design

A simple python plasmid map creator

An unofficial API for Addgene, the open-source plasmid repository.

Script to obtain plasmid id from WGS data using bowtie2 to map