A tool for the spatial analysis of diversity
A comprehensive and customizable R package for microbiome analysis.
A pipeline for phylogenetic diversity analysis of GBIF-mediated data
parallel, efficient and ensemble analysis of Rao's Q spectral diversity using remote sensing datasets.
The following codes are focused on microbiome analysis, alpha, beta and relative abundance differences.
🦠Research project in Bioinformatics Institute 2023-2024
R package for building turnover saturation curves via bootstrapping
Microbiome Data Analysis
verificacao da homogeneidade biotica em bioma de restinga de mata atlantica atraves de testes de alfa e beta diversidade para riqueza e abundancia de especies
The Local Ecological Footprinting Tool (LEFT), is a web-based decision support tool which can help businesses minimise the environmental impacts of their activities when they make decisions about how land is used.
🌍🌾 Presentation of the article "Climate change may alter the availability of wild food plants in the Brazilian semiarid"
Data and code of Bauer et al. (2024) J Veg Sci
Take advantage of the adehabitat packages in R to determine ecological community richness: including alpha, beta, and gamma diversity!
🦇🧫📊Supplementary materials for study on bat gut shotgun metagenomics
Meta-analysis of microbial diversity of metagenomic data from microbial fuel cells for bioelectricity and pollutant removal
Alpha, beta and gamma diversities are computed and visualized using formulas and using the R package vegetarian.
metaGEENOME is a 16S rRNA metagenomic analysis tool that encompasses nearly all steps of downstream analysis.
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