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Update GWAS tutorial vcf2zarr schema to include 'variant_length' fiel… Build NumPy 2 #69: Commit 3ed245b pushed by tomwhite
January 14, 2025 12:49 7m 6s fix-zarr-python-v3-ci
fix-zarr-python-v3-ci
January 14, 2025 12:49 7m 6s
Fixes for zarr-python 3.0.0 Build NumPy 2 #68: Commit 2c22815 pushed by tomwhite
January 14, 2025 10:25 7m 7s fix-zarr-python-v3-ci
fix-zarr-python-v3-ci
January 14, 2025 10:25 7m 7s
Fix CI for Zarr Python v3 Build NumPy 2 #67: Commit cb34376 pushed by tomwhite
January 14, 2025 10:01 7m 18s fix-zarr-python-v3-ci
fix-zarr-python-v3-ci
January 14, 2025 10:01 7m 18s
Run popgen and windowing tests on Cubed Build NumPy 2 #66: Commit fff899d pushed by tomwhite
December 18, 2024 14:59 6m 25s cubed-popgen
cubed-popgen
December 18, 2024 14:59 6m 25s
Run popgen and windowing tests on Cubed Build NumPy 2 #65: Commit 4830b3d pushed by tomwhite
December 18, 2024 14:57 6m 35s cubed-popgen
cubed-popgen
December 18, 2024 14:57 6m 35s
popgen and windowing Build NumPy 2 #64: Commit 65988dd pushed by tomwhite
December 18, 2024 14:52 6m 26s cubed-popgen
cubed-popgen
December 18, 2024 14:52 6m 26s
Fix window_statistic for cubed Build NumPy 2 #63: Commit 510f6ed pushed by tomwhite
December 7, 2024 10:34 6m 39s cubed-popgen
cubed-popgen
December 7, 2024 10:34 6m 39s
Remove dask-ml dependency (since sgkit now includes TruncatedSVD) Build NumPy 2 #62: Commit 7c0baf8 pushed by tomwhite
November 18, 2024 11:13 7m 54s dist-array-pca
dist-array-pca
November 18, 2024 11:13 7m 54s
Remove dask-ml dependency (since sgkit now includes TruncatedSVD) Build NumPy 2 #61: Commit 3520317 pushed by tomwhite
November 18, 2024 11:00 1m 12s dist-array-pca
dist-array-pca
November 18, 2024 11:00 1m 12s
Fix coverage and remove broken example code in doc Build NumPy 2 #60: Commit b6e940b pushed by tomwhite
November 18, 2024 10:07 7m 56s dist-array-pca
dist-array-pca
November 18, 2024 10:07 7m 56s
Fix distance (cpu) Build NumPy 2 #59: Commit e1119ca pushed by tomwhite
November 4, 2024 16:45 11m 25s upstream-build-fixes-with-distance
upstream-build-fixes-with-distance
November 4, 2024 16:45 11m 25s
Run tests using Zarr Python v3 Build NumPy 2 #58: Commit 88cde21 pushed by tomwhite
November 4, 2024 15:58 8m 2s zarr-python-v3
zarr-python-v3
November 4, 2024 15:58 8m 2s
Run tests using Zarr Python v3 Build NumPy 2 #57: Commit c4f728f pushed by tomwhite
November 4, 2024 15:22 8m 7s zarr-python-v3
zarr-python-v3
November 4, 2024 15:22 8m 7s
Run tests using Zarr Python v3 Build NumPy 2 #56: Commit dbc926f pushed by tomwhite
November 4, 2024 14:52 6m 35s zarr-python-v3
zarr-python-v3
November 4, 2024 14:52 6m 35s
Run tests using Zarr Python v3 Build NumPy 2 #55: Commit f2983f3 pushed by tomwhite
November 4, 2024 14:47 6m 30s zarr-python-v3
zarr-python-v3
November 4, 2024 14:47 6m 30s
Drop Python 3.9 Build NumPy 2 #54: Commit 1c87197 pushed by tomwhite
November 4, 2024 14:10 7m 57s drop-python-3.9
drop-python-3.9
November 4, 2024 14:10 7m 57s
Drop Python 3.9 Build NumPy 2 #53: Commit c60631e pushed by tomwhite
November 4, 2024 13:51 7m 57s drop-python-3.9
drop-python-3.9
November 4, 2024 13:51 7m 57s
Try removing Windows cbgen restriction Build NumPy 2 #52: Commit 3bd542b pushed by tomwhite
November 4, 2024 10:35 8m 6s drop-python-3.9
drop-python-3.9
November 4, 2024 10:35 8m 6s
Drop Python 3.9 Build NumPy 2 #51: Commit 71ae675 pushed by tomwhite
November 4, 2024 10:20 8m 5s drop-python-3.9
drop-python-3.9
November 4, 2024 10:20 8m 5s
Don't use local functions to wrap numba functions Build NumPy 2 #50: Commit af556e9 pushed by tomwhite
November 4, 2024 10:09 8m 2s remove-numba-local-fns
remove-numba-local-fns
November 4, 2024 10:09 8m 2s
Fix problem with lambdas wrapping numba functions get recompiled Build NumPy 2 #49: Commit e83b52c pushed by tomwhite
October 29, 2024 15:00 17m 54s upstream-build-fixes
upstream-build-fixes
October 29, 2024 15:00 17m 54s
Use sgkit.distarray for PCA Build NumPy 2 #48: Commit 22a840a pushed by tomwhite
October 28, 2024 13:01 6m 26s dist-array-pca
dist-array-pca
October 28, 2024 13:01 6m 26s
Don't run upstream CI on Python 3.12 due to cbgen incompatibility Build NumPy 2 #47: Commit 5baef49 pushed by tomwhite
October 28, 2024 09:41 22m 47s upstream-build-fixes
upstream-build-fixes
October 28, 2024 09:41 22m 47s
Unpin Dask since slowdown issue was addressed in 2024.10.0 Build NumPy 2 #46: Commit 5498607 pushed by tomwhite
October 28, 2024 09:33 22m 0s upstream-build-fixes
upstream-build-fixes
October 28, 2024 09:33 22m 0s
Remove use of dask.array.ma in PCA in favour of array API compliant f… Build NumPy 2 #45: Commit 49c6b6b pushed by tomwhite
October 14, 2024 12:04 7m 58s remove-pca-masked-arrays
remove-pca-masked-arrays
October 14, 2024 12:04 7m 58s