Computational biologist formerly at @NYULANGONE in Ruggles & Fenyő labs
- New York
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BADAS_Nextflow_Tutorial
BADAS_Nextflow_Tutorial PublicNextflow tutorial for the BADAS series at NYU Center for Genomics and Systems Biology
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Awesome_Malaria_Parasite_Imaging_Datasets
Awesome_Malaria_Parasite_Imaging_Datasets PublicThis repository is an attempt to list all malaria parasite imaging datasets (blood smears). Contributions welcome!
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3-nextflow-patterns
3-nextflow-patterns PublicThis repo contains code snippets and markdown illustrating 5 useful Nextflow patterns.
Nextflow 3
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singularity_containers
singularity_containers PublicSingularityHub container definition for a containers that I need for my workflows that aren't already available on biocontainers etc.
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NCBI-Hackathons/BarcSeek
NCBI-Hackathons/BarcSeek PublicBarcSeek: A Flexible Barcode Partitioning Tool for Demultiplexing Genomic Sequencing Data
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