updated zenodo files and fixed snippet issue

topics/single-cell/tutorials/scatac-standard-processing-snapatac2/data-library.yaml

@@ -25,3 +25,7 @@ items:
         src: url
         ext: auto
         info: https://zenodo.org/records/11369811
+      - url: https://zenodo.org/api/records/11369811/files/BAM_500-PBMC.bam/content
+        src: url
+        ext: auto
+        info: https://zenodo.org/records/11369811

topics/single-cell/tutorials/scatac-standard-processing-snapatac2/tutorial.md

@@ -151,7 +151,7 @@ SnapATAC2 requires 3 input files for the standard pathway of processing:
 >  > <hands-on-title>fragment file</hands-on-title>
 >  > 1. Import the file  `BAM_500-PBMC` from [Zenodo]({{ page.zenodo_link }}) or from the shared data library
 >  > ```
->  > {{ page.zenodo_link }}/files/atac_pbmc_5k_nextgem_fragments.tsv
+>  > {{ page.zenodo_link }}/files/BAM_500-PBMC.bam
 >  > ```
 >  >   - This dataset contains mapped reads in the `BAM` format. 
 >  >   - It was generated by following the tutorial ["Pre-processing of 10X Single-Cell ATAC-seq Datasets"]( {% link topics/single-cell/tutorials/scatac-preprocessing-tenx/tutorial.md %} ) until the output of {% tool [Map with BWA-MEM](toolshed.g2.bx.psu.edu/repos/devteam/bwa/bwa_mem/0.7.18) %}
@@ -885,7 +885,9 @@ To manually annotate the *Leiden* clusters, we will need to perform multiple ste
 > 7. Rename the generated file to `Cell type annotation` and {% icon galaxy-eye %} inspect the file to check if the replacement was successful
 >    - check if the datatype is set to `tabular`
 >    - you may need to change the datatype manually
+> 
 >      {% snippet faqs/galaxy/datasets_change_datatype.md datatype="tabular"%}
+> 
 > 8. {% tool [Manipulate AnnData](toolshed.g2.bx.psu.edu/repos/iuc/anndata_manipulate/anndata_manipulate/0.10.3+galaxy0) %} with the following parameters:
 >    - {% icon param-file %} *"Annotated data matrix"*: `Anndata 5k PBMC gene_matrix magic UMAP`
 >    - *"Function to manipulate the object"*: `Add new annotation(s) for observations or variables`