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support for fasta files or bam files as input in whippet-quant? #105

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wbvguo opened this issue Sep 10, 2020 · 0 comments
Open

support for fasta files or bam files as input in whippet-quant? #105

wbvguo opened this issue Sep 10, 2020 · 0 comments

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@wbvguo
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wbvguo commented Sep 10, 2020 •
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Hi, may I ask if fasta file can also be used as input besides fastq files?
Also, sometimes it takes a lot of computing resources to redo the alignment. May I ask if you plan to expand the whippet-quant that starts from bam files?

Thanks!
@wbvguo wbvguo changed the title support of fasta files or bam files? support of fasta files or bam files as input in whippet-quant? Sep 10, 2020
@wbvguo wbvguo changed the title support of fasta files or bam files as input in whippet-quant? support for fasta files or bam files as input in whippet-quant? Sep 10, 2020
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