0.03.2

v0.03.2

• Updated ProteoWizard (v3.0.22231)
• Updated Dinosaur (v1.2.1) to fix Maven build
• Updated MaRaCluster (v1.02.1)

0.03.1

v0.03.1

• Fixed Dinosaur issue with recent ProteoWizard mzML files (#20)
• Fixed MaRaCluster issue with nativeIds in recent ProteoWizard mzML files

0.03

• Fixed ill-defined initialization of linkPEP threshold for match-between-runs
• Fixed problem with specifying consensus spectrum file (#4)
• Fixed counting feature match candidates
• Reproducible results in Dinosaur given random seed
• Check for nan and inf values for alignment RMSE (#12)
• Resolves duplicate retention time knots issue (#12)
• Added minimum retention time pairs/knots check (#13)
• Fixed setting maracluster pval threshold (#15)
• Added decoy offset as command line argument
• Added functionality to save featureToGroup map to disk (#18)
• Added functionality to write features and matches to temporary files (#18)
• Temporarily fixed MzML format from 2020 Proteowizard output that causes dinosaur to hang (#20)

0.02

• Updated MaRaCluster and Proteowizard dependencies to latest version
• Fixed building scripts for all platforms

0.01

The initial release of Quandenser.