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@statbiophys

Statistical Biophysics Consortium

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  1. OLGA OLGA Public

    Compute generation probabilities of CDR3 amino acid and nucleotide sequences

    Python 48 17

  2. SONIA SONIA Public

    Infer selection pressures on features of amino acid CDR3 sequences.

    Python 23 7

  3. HLAGuessr HLAGuessr Public

    Jupyter Notebook 16 2

  4. soNNia soNNia Public

    Python 13 4

  5. pygor3 pygor3 Public

    pygor3 repository

    Jupyter Notebook 9 4

  6. NoisET NoisET Public

    NoisET is an easy-to-use python package that implements and generalizes a previously developed Bayesian method in [Puelma Touzel et al, 2020] ). It can be used to learn experimental noise models fo…

    Jupyter Notebook 8 2

Repositories

Showing 10 of 35 repositories
  • soNNia Public
    statbiophys/soNNia’s past year of commit activity
    Python 13 GPL-3.0 4 3 0 Updated Nov 14, 2024
  • statbiophys/HLAGuessr’s past year of commit activity
    Jupyter Notebook 16 GPL-3.0 2 1 0 Updated Oct 8, 2024
  • ATrieGC Public

    A python/c++ module to store large amount of sequences and look at hamming distance clustering

    statbiophys/ATrieGC’s past year of commit activity
    C++ 1 GPL-3.0 1 0 0 Updated Sep 7, 2024
  • pygor3 Public

    pygor3 repository

    statbiophys/pygor3’s past year of commit activity
    Jupyter Notebook 9 4 5 3 Updated Jul 14, 2024
  • HILARy Public

    Python package for inference of lineages in antibody repertoires

    statbiophys/HILARy’s past year of commit activity
    Jupyter Notebook 5 GPL-3.0 3 0 1 Updated Jul 2, 2024
  • SONIA Public

    Infer selection pressures on features of amino acid CDR3 sequences.

    statbiophys/SONIA’s past year of commit activity
    Python 23 GPL-3.0 7 1 1 Updated Apr 17, 2024
  • tools Public

    Repository where useful tools can be reused by others in the group

    statbiophys/tools’s past year of commit activity
    0 0 0 0 Updated Apr 8, 2024
  • catede Public Forked from camacesco/catede

    Tools for information theoretic measures estimation.

    statbiophys/catede’s past year of commit activity
    Python 2 1 0 0 Updated Feb 13, 2024
  • ENS-survival-kit Public

    Useful tools for your life at ENS

    statbiophys/ENS-survival-kit’s past year of commit activity
    2 0 0 0 Updated Jan 8, 2024
  • STAR Public

    Single Time-point Antibody Recognition

    statbiophys/STAR’s past year of commit activity
    Jupyter Notebook 3 0 1 0 Updated Dec 18, 2023

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