make arpeggio pdbecif >= 1.5 compliant

sonnybrilliant · Oct 14, 2020 · bdc9d25 · bdc9d25
1 parent 00928fc
commit bdc9d25
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Showing 2 changed files with 5 additions and 3 deletions.
diff --git a/arpeggio/core/protein_reader.py b/arpeggio/core/protein_reader.py
@@ -8,7 +8,7 @@
 import numpy
 from Bio import PDB
 from Bio.PDB.StructureBuilder import StructureBuilder
-from mmCif.mmcifIO import MMCIF2Dict
+from pdbecif.mmcif_io import MMCIF2Dict
 import openbabel as ob
 
 

diff --git a/setup.py b/setup.py
@@ -31,8 +31,10 @@
     ],
     zip_safe=False,
     include_package_data=True,
-    install_requires=["pdbecif", "numpy", "biopython"],
-    tests_require=["pytest"],
+    install_requires=["pdbecif>=1.5", "numpy", "biopython"],
+    extras_require={
+        "tests": ["pytest", "pytest-cov"]
+    },
     entry_points={
         "console_scripts": ["arpeggio=arpeggio.scripts.process_protein_cli:main"]
     },