MMseqs2 Release 17-b804f

MMseqs2 Release 17 is mostly a bug fix release. Highlights include usability improvements in MMseqs2-GPU and fix for a common crash in the prefilter that was affecting many clustering runs.

New Features and Enhancements

• result2profile can print frequencies in TSV format (c2c3ad9)
• add a new masking mode --mask-n-repeat (c2c3ad9)
• Improve GPU clients in server mode to wait for databasess to be loaded (e095774)
• GPU server now takes CUDA_VISIBLE_DEVICES into account. (b804fbe)
• Reduced glibc requirements for precompiled MMseqs2-GPU binaries to 2.17 (i.e. CentOS 7; db8ad2d)

Bug Fixes

• Segmentation fault in easy-cluster starting in #916 (dc7f8ad)
• GPU version generated corrupted sequence outputs #912 (e3b16fa)
• Sequences starting with * could break Sequence mapping #927 (492297b)
• Indexes without k-mer index are masked now (4766f92)
• Invalid taxids check in majoritylca does not abort the whole process (8d17137)
• Merged taxID larger than any taxid in nodes.dmp could corrupt memory #931 (fd37b37)

Developer Notes

• Export NATIVE_ARCH in cmake (17cd5c0)