Tims tof reader

[Alexander-Sol]

Added support for timsTOF data files (.d)

TimsTofFileReader is a child class of MsDataFile. Currently, only DDA PASEF data is supported.

Dynamic loading is not supported at this time.

Replaces PR #800

[codecov]

Codecov Report

Attention: Patch coverage is 86.80947% with 117 lines in your changes missing coverage. Please review.

Project coverage is 77.44%. Comparing base (6411360) to head (dd4b1d3).

Files with missing lines	Patch %	Lines
mzLib/Readers/timsTOF/TimsTofFileReader.cs	88.01%	27 Missing and 11 partials ⚠️
mzLib/Readers/timsTOF/FrameProxy.cs	78.97%	29 Missing and 8 partials ⚠️
mzLib/Readers/timsTOF/TimsConversion.cs	62.85%	11 Missing and 2 partials ⚠️
mzLib/Readers/timsTOF/TofSpectraMerger.cs	95.28%	4 Missing and 6 partials ⚠️
mzLib/Readers/timsTOF/TimsDataScan.cs	80.00%	9 Missing ⚠️
mzLib/Readers/timsTOF/Tables.cs	82.97%	8 Missing ⚠️
mzLib/Readers/Util/SupportedFileTypes.cs	75.00%	1 Missing and 1 partial ⚠️

Additional details and impacted files

@@            Coverage Diff             @@
##           master     #812      +/-   ##
==========================================
+ Coverage   77.21%   77.44%   +0.22%     
==========================================
  Files         218      225       +7     
  Lines       32966    33846     +880     
  Branches     3413     3502      +89     
==========================================
+ Hits        25455    26212     +757     
- Misses       6944     7037      +93     
- Partials      567      597      +30     

Files with missing lines	Coverage Δ
mzLib/MassSpectrometry/MsDataScan.cs	86.24% <100.00%> (+1.62%)	⬆️
mzLib/MassSpectrometry/MzSpectra/MzPeak.cs	70.00% <ø> (ø)
mzLib/MzLibUtil/ClassExtensions.cs	100.00% <100.00%> (ø)
mzLib/Readers/Bruker/BrukerFileReader.cs	79.32% <ø> (-1.86%)	⬇️
mzLib/Readers/MsDataFileReader.cs	100.00% <100.00%> (ø)
mzLib/Readers/MzML/MzmlMethods.cs	99.79% <ø> (ø)
mzLib/Readers/Thermo/ThermoRawFileReader.cs	81.32% <ø> (ø)
mzLib/Readers/timsTOF/Records.cs	100.00% <100.00%> (ø)
mzLib/Readers/Util/SupportedFileTypes.cs	95.55% <75.00%> (-2.04%)	⬇️
mzLib/Readers/timsTOF/Tables.cs	82.97% <82.97%> (ø)
... and 5 more