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Tims tof reader#800

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Alexander-Sol wants to merge 37 commits intosmith-chem-wisc:mastersmith-chem-wisc/mzLib:masterfrom Alexander-Sol:timsTofReaderAlexander-Sol/mzLib:timsTofReaderCopy head branch name to clipboard

+1,924-31

Commits

Commits on Nov 18, 2023

• Started frameProxy class

  Alexander-Sol

  committed
  d5cb13f

Commits on Nov 20, 2023

• Added conversion functions

  Alexander-Sol

  committed
  d001aca

Commits on Nov 21, 2023

• Added useful functions to FrameProxy

  Alexander-Sol

  committed
  ef23825

Commits on Nov 22, 2023

• Started methods for scan building, added new MsDataScan class

  Alexander-Sol

  committed
  93d47c6

• Minor

  Alexander-Sol

  committed
  5675c5c

Commits on Nov 29, 2023

• TimsTof reader is working!!!

  Show description for a574388
  Alexander-Sol

  committed
  a574388

Commits on Nov 30, 2023

• minor

  Alexander-Sol

  committed
  57a061f

• Fixed merge conflicts

  Alexander-Sol

  committed
  b59ee70

• Fixed merge booboo

  Alexander-Sol

  committed
  b8fe87c

Commits on Dec 7, 2023

• TimsDataScan is missing

  Alexander-Sol

  committed
  6dd39d1

Commits on Dec 8, 2023

• started spectra addition stuff

  Alexander-Sol

  committed
  a9df28f

Commits on Dec 9, 2023

• Finished spectraMerger class

  Alexander-Sol

  committed
  1ae9727

Commits on Jan 12, 2024

• Reader reads in + merges all spectra/scans

  Alexander-Sol

  committed
  5632fa0

Commits on Jan 13, 2024

• Parallelized, but made it worse

  Alexander-Sol

  committed
  91096ee

Commits on Jan 16, 2024

• Changed MS2 merger to keep list nodes

  Alexander-Sol

  committed
  23e0a8c

• reverted MS2 merger changes

  Alexander-Sol

  committed
  7e2177e

Commits on Jan 30, 2024

• unsure

  Alexander-Sol

  committed
  be4ca1b

Commits on Apr 17, 2024

• Merge branch 'master' into timsTOFReader

  Alexander-Sol

  authored
  b038767

Commits on Jun 19, 2024

• Merge branch 'timsTOFReader' of https://github.com/Alexander-Sol/mzLib into timsTOFReader

  Alexander-Sol

  committed
  cad6bae

• Working but slowly

  Alexander-Sol

  committed
  e766260

• idk

  Alexander-Sol

  committed
  0236386

Commits on Jun 20, 2024

• Added support for missing Pasef scans, missing precursors

  Alexander-Sol

  committed
  4ca6874

Commits on Jul 8, 2024

• Making progress

  Alexander-Sol

  committed
  94beb90

Commits on Jul 9, 2024

• Seems to be working

  Alexander-Sol

  committed
  952f021

Commits on Jul 10, 2024

• Removed empty scans

  Alexander-Sol

  committed
  1d47d49

Commits on Sep 15, 2024

• fixed merge conflicts

  Alexander-Sol

  committed
  a9fb8b3

• Finished timsTof reader, added tests

  Alexander-Sol

  committed
  26285c5

• Updated timsdata.dll path in DllImport call

  Alexander-Sol

  committed
  d6b9e75

Commits on Sep 16, 2024

• Fixed broken tests

  Alexander-Sol

  committed
  f6c740a

• changed bruker dll location in directory

  Alexander-Sol

  committed
  21aefc9

• updated references

  Alexander-Sol

  committed
  6417ef4

• updated github actions

  Alexander-Sol

  committed
  26d2058

• added depndencies

  Alexander-Sol

  committed
  fa6be72

• edited workflow

  Alexander-Sol

  committed
  b1a36f3

• workflow

  Alexander-Sol

  committed
  aeae7c1

Commits on Sep 18, 2024

• mzLookup table

  Alexander-Sol

  committed
  8c9ae65

Commits on Sep 20, 2024

• memoization of mz values, commented out, local tests

  Alexander-Sol

  committed
  da39272