Merge branch 'main' into git-cliff

.github/workflows/changelog.yml

@@ -13,7 +13,7 @@ jobs:
         fetch-depth: 0
     - uses: BobAnkh/[email protected]
       with:
-        REPO_NAME: 'nicrie/xeofs'
+        REPO_NAME: 'xarray-contrib/xeofs'
         ACCESS_TOKEN: ${{ secrets.CHANGELOG_TOKEN }}
         PATH: 'CHANGELOG.md'
         COMMIT_MESSAGE: 'docs(CHANGELOG): update release notes'

.github/workflows/ci.yml

@@ -8,51 +8,40 @@ on:
     types: [opened, synchronize, reopened, edited]
   workflow_dispatch: # Allows you to run this workflow manually from the Actions tab
 
-jobs:
-
-  Code_Quality_Check:
 
+jobs:
+  test:
+    name: py${{ matrix.versions.python-version }} ${{ matrix.versions.resolution }}
     runs-on: ubuntu-latest
     strategy:
       matrix:
-        python-version: ['3.10', 3.11]
+        versions:
+          - python-version: '3.10'
+            resolution: lowest-direct
+          - python-version: '3.11'
+            resolution: highest
+          - python-version: '3.12'
+            resolution: highest
     steps:
-      - name: Checkout Repository
-        uses: actions/checkout@v3
-
-      - name: Setup Python ${{ matrix.python-version }}
-        uses: actions/setup-python@v3
-        with:
-          python-version: ${{ matrix.python-version }}
+      - uses: actions/checkout@v4
 
-      - name: Setup Poetry
-        uses: abatilo/actions[email protected]
+      - name: Setup Python ${{ matrix.versions.python-version }}
+        uses: actions/setup-python@v5
         with:
-          poetry-version: 1.5.1
+          python-version: ${{ matrix.versions.python-version }}
 
-      - name: Configure Poetry Settings
-        shell: bash
-        run: python -m poetry config virtualenvs.in-project true
-
-      - name: Verify Poetry Version
-        run: poetry --version
-
-      - name: Install Project Dependencies
-        run: python -m poetry install --with dev
-
-      - name: Lint Codebase with flake8
+      - name: Install dependencies
         run: |
-          python -m poetry run flake8 . --exclude .venv --count --select=E9,F63,F7,F82 --show-source --statistics
-          python -m poetry run flake8 . --exclude .venv --count --exit-zero --max-complexity=10 --max-line-length=79 --statistics
+          pip install uv
+          uv pip install . -r pyproject.toml --system --extra dev --resolution ${{ matrix.versions.resolution }}
 
-      - name: Execute Tests with pytest and Coverage
+      - name: Execute Tests
         run: |
-          python -m poetry run coverage run -m pytest
-          python -m poetry run coverage report -m
-          python -m poetry run coverage xml
+          coverage run -m pytest -n auto --doctest-glob="README.md"
+          coverage report -m
+          coverage xml
 
       - name: Upload Coverage Report to Codecov
         uses: codecov/codecov-action@v3
         with:
           files: ./coverage.xml
-

.github/workflows/formatting.yml

@@ -0,0 +1,27 @@
+name: Formatting
+
+on:
+  pull_request:
+    branches: [main, develop]
+    types: [opened, synchronize, reopened, edited]
+  workflow_dispatch: # Allows you to run this workflow manually from the Actions tab
+
+
+jobs:
+  ruff:
+    runs-on: ubuntu-latest
+    steps:
+      - uses: actions/checkout@v4
+      - name: Install Python
+        uses: actions/setup-python@v5
+        with:
+          python-version: "3.11"
+      - name: Install dependencies
+        run: |
+          python -m pip install --upgrade pip
+          pip install ruff
+      # Update output format to enable automatic inline annotations.
+      - name: Run Ruff
+        run: |
+          ruff check
+          ruff format --check

.github/workflows/pull-request-linting.yml

@@ -5,15 +5,15 @@
 # Aim: ensure that PR title matches the concentional commits spec
 # More info: https://github.com/marketplace/actions/semantic-pull-request
 
-name: "Pull Request Linting"
+name: "PR Linting"
 
 on:
   pull_request_target:
     types: [opened, edited, synchronize]
 
 jobs:
-  PR_Validation:
-    name: Validate Pull Request Title
+  validate:
+    name: validate conventional commit in title
     runs-on: ubuntu-latest
     steps:
       - name: Run Semantic Pull Request Linting

.pre-commit-config.yaml

@@ -1,19 +1,21 @@
 repos:
 
-# - repo: ...
-
+  # Conventional Commits
   - repo: https://github.com/compilerla/conventional-pre-commit
     rev: v1.2.0
     hooks:
       - id: conventional-pre-commit
         stages: [commit-msg]
         args: [] # optional: list of Conventional Commits types to allow
-  - repo: https://github.com/psf/black
-    rev: 23.7.0
+  # Lint and format with ruff
+  - repo: https://github.com/astral-sh/ruff-pre-commit
+    rev: v0.3.4
+    hooks:
+      - id: ruff
+        args: [ --fix ]
+      - id: ruff-format
+  # Strip output from Jupyter Notebooks
+  - repo: https://github.com/kynan/nbstripout
+    rev: 0.6.1
     hooks:
-      - id: black
-        # It is recommended to specify the latest version of Python
-        # supported by your project here, or alternatively use
-        # pre-commit's default_language_version, see
-        # https://pre-commit.com/#top_level-default_language_version
-        language_version: python3.11
+      - id: nbstripout