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Faster, cleaner milestone analysis (#370)
2.4.0 has a significant speed regression in the milestone analysis; this cleans up the milestone analysis code and partially restores the speed. The primary user-visible change is the speed improvement, but this does make minor changes to pY and SA analysis (see 1e75d3a message). It also improves handling of stupid Entity sources (d34bce1), if there are any mods that abuse how entities come into existence.
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