-
Notifications
You must be signed in to change notification settings - Fork 609
Commit
This commit does not belong to any branch on this repository, and may belong to a fork outside of the repository.
- Loading branch information
1 parent
f29eff2
commit e5ab2cd
Showing
3 changed files
with
6 additions
and
7 deletions.
There are no files selected for viewing
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,7 +1,6 @@ | ||
(v0.4.4)= | ||
### 0.4.4 {small}`2018-02-26` | ||
|
||
- embed cells using {func}`~scanpy.api.tl.umap` {cite:p}`McInnes2018`: | ||
`examples <https://github.com/theislab/scanpy/pull/92>`_ | ||
- score sets of genes, e.g. for cell cycle, using :func:`~scanpy.api.tl.score_genes` {cite:p}`Satija2015`: | ||
`notebook <https://nbviewer.jupyter.org/github/theislab/scanpy_usage/blob/master/180209_cell_cycle/cell_cycle.ipynb>`_ | ||
- embed cells using {func}`~scanpy.tl.umap` {cite:p}`McInnes2018` {pr}`92` {smaller}`G Eraslan` | ||
- score sets of genes, e.g. for cell cycle, using {func}`~scanpy.tl.score_genes` {cite:p}`Satija2015`: | ||
[notebook](https://nbviewer.jupyter.org/github/theislab/scanpy_usage/blob/master/180209_cell_cycle/cell_cycle.ipynb) |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Original file line number | Diff line number | Diff line change |
---|---|---|
@@ -1,5 +1,5 @@ | ||
(v1.3.7)= | ||
### 1.3.7 {small}`2019-01-02` | ||
|
||
- one can now `import scanpy as sc` instead of `import scanpy.api as sc`, see `here <https://scanpy.readthedocs.io/en/latest/api/>`__ | ||
- :func:`~scanpy.external.tl.phenograph` wraps the graph clustering package Phenograph {cite:p}`Levine2015` {smaller}`thanks to A Mousa` | ||
- API changed from `import scanpy as sc` to `import scanpy.api as sc`. | ||
- {func}`~scanpy.external.tl.phenograph` wraps the graph clustering package Phenograph {cite:p}`Levine2015` {smaller}`thanks to A Mousa` |
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters