tests #66

	name: tests
	on:
	push:
	pull_request:
	branches:
	# only branches from forks which have the form 'user:branch-name'
	- ':'
	schedule:
	- cron: '42 0 * * 0'
	jobs:
	run_tests:
	strategy:
	fail-fast: false
	matrix:
	os: [ubuntu-latest]
	python: ["3.11", "3.12"]
	options: [""]
	include:
	- os: macos-latest
	python: "3.12"
	- os: windows-latest
	python: "3.12"
	- os: ubuntu-latest
	python: "3.12"
	options: ["warnings"]
	- os: ubuntu-latest
	python: "3.12"
	options: ["full"]
	runs-on: ${{ matrix.os }}
	env:
	# set additional runtest options (--full, -W error)
	test_options: ${{ contains(matrix.options, 'full') && '--full' \|\| '' }} ${{ contains(matrix.options, 'warnings') && '-W error' \|\| '' }}
	defaults:
	run:
	shell: bash -l {0}
	steps:
	- uses: actions/checkout@v4
	- name: Setup conda
	uses: conda-incubator/setup-miniconda@v3
	with:
	python-version: ${{ matrix.python }}
	- name: install dependencies
	run: \|
	pip install pytest pytest-cov rnajena-sugar tqdm
	- name: print conda environment info
	run: \|
	conda info -a
	conda list
	pip list
	- name: install package
	run: \|
	pip install -v --no-deps .
	- name: run test suite
	run: \|
	mkdir empty; cd empty
	pytest ../anchorna/tests --cov anchorna --cov-report=xml:../coverage.xml ${{ env.test_options }}
	- name: upload coverage
	uses: codecov/codecov-action@v4
	with:
	token: ${{ secrets.CODECOV_TOKEN }} # required
	fail_ci_if_error: true

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