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MAINT: updating classifiers
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lizgehret committed May 30, 2024
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8 changes: 4 additions & 4 deletions source/tutorials/feature-classifier.rst
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Expand Up @@ -32,10 +32,6 @@ We will also download the representative sequences from the `Moving Pictures`_ t
:url: https://data.qiime2.org/2024.2/tutorials/training-feature-classifiers/85_otu_taxonomy.txt
:saveas: 85_otu_taxonomy.txt

.. download::
:url: https://data.qiime2.org/2024.2/tutorials/training-feature-classifiers/rep-seqs.qza
:saveas: rep-seqs.qza

Next we import these data into QIIME 2 Artifacts. Since the Greengenes reference taxonomy file (:file:`85_otu_taxonomy.txt`) is a tab-separated (TSV) file without a header, we must specify ``HeaderlessTSVTaxonomyFormat`` as the *source format* since the default *source format* requires a header.

.. command-block::
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Finally, we verify that the classifier works by classifying the representative sequences from the `Moving Pictures`_ tutorial and visualizing the resulting taxonomic assignments.

.. download::
:url: https://data.qiime2.org/2024.2/tutorials/training-feature-classifiers/rep-seqs.qza
:saveas: rep-seqs.qza

.. command-block::

qiime feature-classifier classify-sklearn \
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