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Extract a frequency count of clinical codes from a set of CDA documents

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extract_cda_codes

Command line utility to extract clinical codes from a set of CDA files

Installation

Requires Leiningen, once installed run the following to build the code into a standalone JAR file.

$ lein uberjar

Usage

$ java -jar extract_cda_codes-0.1.0-standalone.jar [options] dir [dir2...]

Where dir is the path to a file system directory containing CDA files.

Options

Switches               Default  Desc                                                        
--------               -------  ----                                                        
-h, --no-help, --help  false    Show help
-o, --output                    A file into which the output will optionally be written, default is stdout  

License

(c) The MITRE Corporation

Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at

http://www.apache.org/licenses/LICENSE-2.0

Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License.

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