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@populationgenomics

Centre for Population Genomics

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  1. production-pipelines production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    Python 7 1

  2. cpg-cost-control cpg-cost-control Public

    A Cloud Function to handle GCP billing budget notifications.

    Python 6 3

  3. talos talos Public

    Rare Disease variant reanalysis tool

    Python 6 4

  4. cuKING cuKING Public

    CUDA-based KING relatedness estimation

    Cuda 5

  5. seqr seqr Public

    Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    Python 3 1

  6. cpg-infrastructure cpg-infrastructure Public

    This repository is used to manage the infrastructure at the CPG

    Python 3 1

Repositories

Showing 10 of 70 repositories
  • seqr Public Forked from broadinstitute/seqr

    web-based analysis tool for rare disease genomics

    populationgenomics/seqr’s past year of commit activity
    Python 3 AGPL-3.0 90 31 3 Updated Jan 20, 2025
  • talos Public

    Rare Disease variant reanalysis tool

    populationgenomics/talos’s past year of commit activity
    Python 6 MIT 4 13 4 Updated Jan 20, 2025
  • cpg-flow Public

    CPG Pipeline Python API

    populationgenomics/cpg-flow’s past year of commit activity
    Python 0 MIT 0 3 3 Updated Jan 20, 2025
  • production-pipelines Public

    Genomics workflows for CPG using Hail Batch

    populationgenomics/production-pipelines’s past year of commit activity
    Python 7 MIT 1 42 (1 issue needs help) 33 Updated Jan 20, 2025
  • images Public

    Reusable single-software docker images

    populationgenomics/images’s past year of commit activity
    Dockerfile 1 MIT 1 2 8 Updated Jan 20, 2025
  • test_workflows_shared Public template
    populationgenomics/test_workflows_shared’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 20, 2025
  • cpg-infrastructure Public

    This repository is used to manage the infrastructure at the CPG

    populationgenomics/cpg-infrastructure’s past year of commit activity
    Python 3 MIT 1 6 (1 issue needs help) 4 Updated Jan 20, 2025
  • hail Public Forked from hail-is/hail

    Scalable genomic data analysis.

    populationgenomics/hail’s past year of commit activity
    Python 1 MIT 252 3 1 Updated Jan 19, 2025
  • metamist Public

    Sample level metadata system

    populationgenomics/metamist’s past year of commit activity
    Python 1 MIT 1 42 21 Updated Jan 19, 2025
  • sv-workflows Public

    Structural Variation Workflows

    populationgenomics/sv-workflows’s past year of commit activity
    Python 1 MIT 2 2 10 Updated Jan 17, 2025
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