GWAS_workshop

How to GWAS

Usage

The jupyter notebooks can be used in an executable environment by clicking the Binder badge above.

To use the notebooks locally, download the notebook(s) of choice and from that directory run

jupyter notebook

To make sure all required packages are installed, it's practical to create the conda environment locally. Download environment.yml

conda env create -f environment.yml

To activate this environment (do this in each new bash window)

conda activate limix

Click here for more information on conda environments. When conda and/or jupyter are not installed locally, we advise installing anaconda.