Participant-B

MERIS atmospheric correction effects using BEAM - using SmacOp

Quick link

• Installation
• Submitting the workflow
• Test the application

Installation

Log on the Developer Cloud Sandbox and run these commands in a shell:

• Install Java 7

sudo yum install -y java-1.7.0-openjdk

• Select Java 7

sudo /usr/sbin/alternatives --config java

This will show on the terminal window:

There are 3 programs which provide 'java'.

  Selection    Command
-----------------------------------------------
 + 1           /usr/java/jdk1.6.0_35/jre/bin/java
   2           /usr/lib/jvm/jre-1.5.0-gcj/bin/java
*  3           /usr/lib/jvm/jre-1.7.0-openjdk.x86_64/bin/java

Enter to keep the current selection[+], or type selection number:

Select java 1.7 out of the menu options by typing the correct number (here it's 3).

• Install the application from github

cd
git clone [email protected]:ocean-color-ac-challenge/Participant-B.git
cd Participant-B
mvn install

• Install the application from rpm

curl -L -O https://github.com/ocean-color-ac-challenge/Participant-B/releases/download/v0.35/Participant-B-x.xx-ciop.noarch.rpm
sudo yum -y install Participant-B-x.xx-ciop.noarch.rpm

where x.xx is the version of the RPM created

Submitting the workflow

• Via the Sandbox shell

Run this command in a shell:

ciop-run

• Via the Web Processing Service dashboard tab

Use your browser to go to the Sandbox dashboard tab at the address http:///dashboard

Click on the Invoke tab

Below the "Process List" click on Participant B

Fill the parameters and click submit.

Test the application

Test Participant-B-01

• Test Procedure

Invoke the application via the Dashboard with the parameters listed in the test inputs specification

• Inputs specification

Parameter	Value
Catalogue	https://challenges.esa.int/eceo/datapackage/RRPAR/description?key=9d79148d-3e17-414b-9983-e4cef9e88ec6
Start date	2002-03-01T00:00:00Z
End date	2012-05-09T23:59:59Z
aerosolType	CONTINENTAL
Aerosol Optical Depth	0.2
Use ECMWF data in the MERIS ADS	true
List of POI for reflectance extraction	BOUS,43.367,7.9|AAOT,45.314,12.508|MOBY,20.828,-157.193
Flag to trigger the publishing of Level 2 products generated	true
Flag to extract POI reflectances	false

• Outputs specification

Output	Size
MER_RR__1PNACR20060730_093546_000021432049_00480_23079_0000.N1.png	10.01 MB
MER_RR__1PNACR20060730_093546_000021432049_00480_23079_0000.N1.tgz	193.73 MB
MER_RR__1PRACR20030306_201313_000026082014_00243_05307_0000.N1.png	21.35 MB
MER_RR__1PRACR20030306_201313_000026082014_00243_05307_0000.N1.tgz	367.81 MB
MER_RR__1PRACR20040903_201756_000026282030_00057_13137_0000.N1.png	21.87 MB
MER_RR__1PRACR20040903_201756_000026282030_00057_13137_0000.N1.tgz	367.88 MB
MER_RR__1PRACR20050504_093419_000026382037_00022_16609_0000.N1.png	14.73 MB
MER_RR__1PRACR20050504_093419_000026382037_00022_16609_0000.N1.tgz	265.6 MB
MER_RR__1PRACR20070920_092716_000026302061_00437_29048_0000.N1.png	14.86 MB
MER_RR__1PRACR20070920_092716_000026302061_00437_29048_0000.N1.tgz	266 MB
MER_RR__1PRACR20080816_092020_000026302071_00165_33786_0000.N1.png	16.58 MB
MER_RR__1PRACR20080816_092020_000026302071_00165_33786_0000.N1.tgz	267.37 MB

• Test pass/fail criteria

All products listed in test outputs specification are generated

Test Participant-B-02

• Test Procedure

Invoke the application via the Dashboard with the parameters listed in the test inputs specification

• Inputs specification

Parameter	Value
Catalogue	https://challenges.esa.int/eceo/datapackage/FRSPAR/description?key=495f181f-47d3-4668-b717-d36d4a560837
Start date	2002-03-01T00:00:00Z
End date	2012-05-09T23:59:59Z
aerosolType	CONTINENTAL
Aerosol Optical Depth	0.2
Use ECMWF data in the MERIS ADS	true
List of POI for reflectance extraction	BOUS,43.367,7.9|AAOT,45.314,12.508|MOBY,20.828,-157.193
Flag to trigger the publishing of Level 2 products generated	true
Flag to extract POI reflectances	false

• Outputs specification

Output	Size
MER_FRS_1PPEPA20040711_020449_000002422028_00275_12353_1787.N1.png	21.16 MB
MER_FRS_1PPEPA20040711_020449_000002422028_00275_12353_1787.N1.tgz	466.86 MB
MER_FRS_1PPEPA20040717_021529_000002642028_00361_12439_1968.N1.png	18.27 MB
MER_FRS_1PPEPA20040717_021529_000002642028_00361_12439_1968.N1.tgz	371.85 MB

• Test pass/fail criteria

All products listed in test outputs specification are generated

Test Participant-B-03

• Test Procedure

Invoke the application via the Dashboard with the parameters listed in the test inputs specification

• Inputs specification

Parameter	Value
Catalogue	https://challenges.esa.int/eceo/datapackage/RRPAR/description?key=9d79148d-3e17-414b-9983-e4cef9e88ec6
Start date	2002-03-01T00:00:00Z
End date	2012-05-09T23:59:59Z
aerosolType	CONTINENTAL
Aerosol Optical Depth	0.2
Use ECMWF data in the MERIS ADS	true
List of POI for reflectance extraction	BOUS,43.367,7.9|AAOT,45.314,12.508|MOBY,20.828,-157.193
Flag to trigger the publishing of Level 2 products generated	false
Flag to extract POI reflectances	true

• Outputs specification

Output	Size
MER_RR__1PNACR20060730_093546_000021432049_00480_23079_0000.N1.txt	1.08 KB
MER_RR__1PRACR20030306_201313_000026082014_00243_05307_0000.N1.txt	0.78 KB
MER_RR__1PRACR20040903_201756_000026282030_00057_13137_0000.N1.txt	0.78 KB
MER_RR__1PRACR20050504_093419_000026382037_00022_16609_0000.N1.txt	1.06 KB
MER_RR__1PRACR20070920_092716_000026302061_00437_29048_0000.N1.txt	1.06 KB
MER_RR__1PRACR20080816_092020_000026302071_00165_33786_0000.N1.txt	1.05 KB

• Test pass/fail criteria

All products listed in test outputs specification are generated

Test Participant-B-04

• Test Procedure

Invoke the application via the Dashboard with the parameters listed in the test inputs specification

• Inputs specification

Parameter	Value
Catalogue	https://challenges.esa.int/eceo/datapackage/FRSPAR/description?key=495f181f-47d3-4668-b717-d36d4a560837
Start date	2002-03-01T00:00:00Z
End date	2012-05-09T23:59:59Z
aerosolType	CONTINENTAL
Aerosol Optical Depth	0.2
Use ECMWF data in the MERIS ADS	true
List of POI for reflectance extraction	CHINA,27,122
Flag to trigger the publishing of Level 2 products generated	false
Flag to extract POI reflectances	true

• Outputs specification

Output	Size
MER_FRS_1PPEPA20040711_020449_000002422028_00275_12353_1787.N1.txt	0.77 KB
MER_FRS_1PPEPA20040717_021529_000002642028_00361_12439_1968.N1.txt	0.77 KB

• Test pass/fail criteria

All products listed in test outputs specification are generated