Skip to content

v1.1.6 - Augmented Akita Patch [2024-04-16]
Compare
Choose a tag to compare
@LilyAnderssonLee LilyAnderssonLee released this 16 Apr 10:54
· 264 commits to master since this release
1.1.6
45ce748
This commit was created on GitHub.com and signed with GitHub’s verified signature.
GPG key ID: B5690EEEBB952194
Learn about vigilant mode.

Added

  • #454 Updated to nf-core pipeline template v2.13.1 (added by @LilyAnderssonLee & @sofstam)
  • #461 Turned on 'strict' Nextflow evaluation runs (added by @jfy133)
  • #461 Optimised database compression so each compressed input database is untarred once, and shared amongst each run with different parameters (added by @jfy133)
  • #461 Added new parameter to optionally save uncompressed databases (added by @jfy133)
  • #471 Removed -stub run in the download_pipeline.yml because the pipeline does not support stub runs on dev (fixed by @LilyAnderssonLee)

Fixed

  • #336 Replaced samplesheet check with nf-validation for both sample and database input sheets (fix by @LilyAnderssonLee)
  • #460 Corrected the channel transformations to combine Kaiju and mOTUs reports with their reference databases (fix by @Midnighter)

Contributors

Midnighter, jfy133, and 2 other contributors
Assets 2
Loading