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Nf test bbmap bbsplit #1912

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Nf test bbmap bbsplit

Nf test bbmap bbsplit #1912

Triggered via pull request October 16, 2023 09:56
@Joon-KlapsJoon-Klaps
opened #1094
nf-test-bbmap-bbsplit
Status Failure
Total duration 2h 52m 41s
Artifacts –

ci.yml

on: pull_request
Choose nextflow versions to test against depending on target branch
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Choose nextflow versions to test against depending on target branch
Matrix: nf-test
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6 errors and 2 warnings
nf-test (22.10.1, star_rsem, docker)
Process completed with exit code 1.
nf-test (latest-everything, star_salmon_with, docker)
System.IO.IOException: No space left on device : '/home/runner/runners/2.310.2/_diag/Worker_20231016-095627-utc.log' at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset) at System.IO.Strategies.BufferedFileStreamStrategy.FlushWrite() at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder) at System.Diagnostics.TextWriterTraceListener.Flush() at GitHub.Runner.Common.HostTraceListener.WriteHeader(String source, TraceEventType eventType, Int32 id) at GitHub.Runner.Common.HostTraceListener.TraceEvent(TraceEventCache eventCache, String source, TraceEventType eventType, Int32 id, String message) at System.Diagnostics.TraceSource.TraceEvent(TraceEventType eventType, Int32 id, String message) at GitHub.Runner.Worker.Worker.RunAsync(String pipeIn, String pipeOut) at GitHub.Runner.Worker.Program.MainAsync(IHostContext context, String[] args) System.IO.IOException: No space left on device : '/home/runner/runners/2.310.2/_diag/Worker_20231016-095627-utc.log' at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset) at System.IO.Strategies.BufferedFileStreamStrategy.FlushWrite() at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder) at System.Diagnostics.TextWriterTraceListener.Flush() at GitHub.Runner.Common.HostTraceListener.WriteHeader(String source, TraceEventType eventType, Int32 id) at GitHub.Runner.Common.HostTraceListener.TraceEvent(TraceEventCache eventCache, String source, TraceEventType eventType, Int32 id, String message) at System.Diagnostics.TraceSource.TraceEvent(TraceEventType eventType, Int32 id, String message) at GitHub.Runner.Common.Tracing.Error(Exception exception) at GitHub.Runner.Worker.Program.MainAsync(IHostContext context, String[] args) Unhandled exception. System.IO.IOException: No space left on device : '/home/runner/runners/2.310.2/_diag/Worker_20231016-095627-utc.log' at System.IO.RandomAccess.WriteAtOffset(SafeFileHandle handle, ReadOnlySpan`1 buffer, Int64 fileOffset) at System.IO.Strategies.BufferedFileStreamStrategy.FlushWrite() at System.IO.StreamWriter.Flush(Boolean flushStream, Boolean flushEncoder) at System.Diagnostics.TextWriterTraceListener.Flush() at System.Diagnostics.TraceSource.Flush() at GitHub.Runner.Common.TraceManager.Dispose(Boolean disposing) at GitHub.Runner.Common.TraceManager.Dispose() at GitHub.Runner.Common.HostContext.Dispose(Boolean disposing) at GitHub.Runner.Common.HostContext.Dispose() at GitHub.Runner.Worker.Program.Main(String[] args)
nf-test (latest-everything, star_salmon_with, docker)
Process completed with exit code 100.
nf-test (latest-everything, star_salmon_with, docker)
Process completed with exit code 1.
nf-test (22.10.1, star_salmon_with, docker)
The hosted runner: GitHub Actions 25 lost communication with the server. Anything in your workflow that terminates the runner process, starves it for CPU/Memory, or blocks its network access can cause this error.
nf-test (22.10.1, star_salmon_with, docker)
Process completed with exit code 1.
nf-test (latest-everything, star_salmon_with, docker)
You are running out of disk space. The runner will stop working when the machine runs out of disk space. Free space left: 84 MB
nf-test (22.10.1, star_salmon_with, docker)
You are running out of disk space. The runner will stop working when the machine runs out of disk space. Free space left: 73 MB