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Reorganise local modules into subfolder/main.nf for consistency #1899

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Reorganise local modules into subfolder/main.nf for consistency

Reorganise local modules into subfolder/main.nf for consistency #1899

Run time

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Job Run time
Run pipeline with test data (23.04.0)
1s
Run pipeline with test data (latest-everything)
1s
Test STAR Salmon with workflow parameters (--skip_qc)
1s
Test HISAT2 with workflow parameters (--skip_qc)
1s
Test Salmon with workflow parameters (--skip_qc)
1s
Test HISAT2 with workflow parameters (--hisat2_index false)
1s
Test Salmon with workflow parameters (--skip_alignment --skip_pseudo_alignment)
1s
Test STAR Salmon with workflow parameters (--skip_trimming)
1s
Test Salmon with workflow parameters (--salmon_index false --transcript_fasta false)
1s
Test STAR Salmon with workflow parameters (--gtf false)
1s
Test STAR RSEM with workflow parameters (--skip_qc)
1s
Test STAR Salmon with workflow parameters (--star_index false)
1s
Test STAR RSEM with workflow parameters (--rsem_index false)
1s
Test STAR Salmon with workflow parameters (--transcript_fasta false)
1s
Test STAR Salmon with workflow parameters (--min_mapped_reads 90)
1s
Test STAR Salmon with workflow parameters (--with_umi)
1s
Test STAR Salmon with workflow parameters (--with_umi --skip_trimming)
1s
Test STAR Salmon with workflow parameters (--remove_ribo_rna --skip_qualimap)
1s
Test STAR Salmon with workflow parameters (--bam_csi_index)
1s
Test STAR Salmon with workflow parameters (--save_align_intermeds --save_reference)
1s
Test STAR Salmon with workflow parameters (--featurecounts_group_type false)
1s
Test STAR Salmon with workflow parameters (--trimmer fastp)
1s
22s